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Protein Overview: gi|15232967, gi|...

General Information:
Name(s) found: gi|7329694 [NCBI NR]
gi|15232967 [NCBI NR]
gi|11358344 [NCBI NR]
Description(s) found:
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  • gi|7329694|emb|CAB82688.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15232967|ref|NP_191643.1| MAP65-4 (MICROTUBULE-ASSOCIATED PROTEIN 65-4) [Arabidopsis thaliana] [NCBI NR]
  • pir||T47895 hypothetical protein T4C21.250 - Arabidopsis thaliana [NCBI NR]
  • (Q9LZY0) Hypothetical protein [athaliana3702.FASTAC.txt]
  • putative protein [Arabidopsis thaliana]gi|11358344|pir||T47895 hypothetical protein T4C21.250 - Arabidopsis thalianagi|15232967|ref|NP_191643.1| microtubule associated protein (MAP65/ASE1) family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Microtubule associated protein (MAP65/ASE1) family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | microtubule associated protein (MAP65/ASE1) family protein | chr3:22488548-22491438 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative protein [Arabidopsis thaliana] [NCBI-RefSeq_human_na_10-15-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: MAP65-4 | microtubule-associated protein 65-4 | chr3:22477573-22480463 REVERSE LENGTH=648 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 648 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    preprophase band [IDA]
    spindle [IDA]
    vacuole [IDA]
    phragmoplast [IDA]
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGETEDEKDA SLADIEKECL SVYKRKVEEA SRGKANLLKE IAVGRAEIAA IGSSMGGQEI  60
   61 HSNSRLGENL KEELENVNVQ LDGLRKRKAE RMIRFNEVID QLLKLSLQLG NPTDYLKKFA 120
  121 AEETDLSLQR LEELRSQLGE LQNEKSKRLE EVECLLKTLN SLCSVLGEDF KGMIRGIHSS 180
  181 LVDSNTRDVS RSTLDKLDMM IVNLREAKLQ RMQKVQDLAV SLLELWNLLD TPAEEQKIFH 240
  241 NVTCSIALTE SEITEANILS VASIKRVEDE VIRLSKIKIT KIKEVILRKR LELEEISRKM 300
  301 HMATEVLKSE NFSVEAIESG VKDPEQLLEQ IDSEIAKVKE EASSRKEILE KVEKWMSACE 360
  361 EESWLEEYNR DDNRYNAGRG AHLTLKRAEK ARLLVNKLPG MVEALTAKVT AWENERGNEF 420
  421 LYDGVRVLSM LGQYKTVWEE KEHEKQRQRD MKKLHGQLIT EQEALYGSKP SPNKSGKKPL 480
  481 RTPVNAAMNR KLSLGGAMLH QSLKHEKATL NSKRTKYYDQ NATSRRDSAL PTLSGRRNSE 540
  541 LPGRIRSKNV PVAGKAARSP MLRKPLSPVT SNILNSPEDH HKDAYTTKER ILTPKTNEEK 600
  601 KRAVPTTPAA SVAMTEATTP FTPAVEKRMD EEDVIVEYSF EEVRAGFC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..302] PSI-BLAST 15.522879 Heavy meromyosin subfragment
    2 View Details [303..472] PSI-BLAST 4.39794 No description for 2iw5A was found.
    3 View Details [473..648] FFAS03 1.08 No description for 2j63A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle