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Protein Overview: gi|11357880, gi|...

General Information:
Name(s) found: gi|7529729 [NCBI NR]
gi|15231737 [NCBI NR]
gi|11357880 [NCBI NR]
Description(s) found:
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  • gi|7529729|emb|CAB86909.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15231737|ref|NP_190873.1| galactose-binding lectin family protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T47562 hypothetical protein F8J2.220 - Arabidopsis thaliana [NCBI NR]
  • (Q9LF87) Hypothetical protein [athaliana3702.FASTAC.txt]
  • putative protein [Arabidopsis thaliana]gi|11357880|pir||T47562 hypothetical protein F8J2.220 - Arabidopsis thalianagi|15231737|ref|NP_190873.1| galactose-binding lectin family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Galactose-binding lectin family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | galactose-binding lectin family protein | chr3:19680062-19680566 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • sugar binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | D-galactoside/L-rhamnose binding SUEL lectin protein | chr3:19669084-19669588 FORWARD LENGTH=142 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • D-galactoside/L-rhamnose binding SUEL lectin protein OS=Arabidopsis thaliana GN=F8J2_220 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 142 amino acids

    Gene Ontology:
    Cellular Component: beta-galactosidase complex [IEA]
    endomembrane system [IEA]
    Biological Process: carbohydrate metabolic process [IEA]
    Molecular Function: sugar binding [IEA][ISS]
    beta-galactosidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDSHCRCLH GFILLVVLFL SFVFSFASKI DVSFHGDEKR SLSSSINSSL SESAEYTMCA  60
   61 THKEAKDGKP IALDFDCEQG YVISKITYAD YGQSTGSCGK FKRGNCGASN TLNIVNKKCL 120
  121 RKEKCKLFVP DKIFGPSHCK GA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..142] Pfam 5.180456 No description for PF02140.9 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle