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Protein Overview: AB29B_ARATH

General Information:
Name(s) found: AB29B_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75335698|sp|Q9LZB8.1|AB29B_ARATH RecName: Full=ABC transporter B family member 29; Short=ABC transporter ABCB.29; Short=AtABCB29; AltName: Full=ABC2 homolog 12 [NCBI NR]
  • gi|7406401|emb|CAB85511.1| ABC transporter-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20259177|gb|AAM14304.1| putative ABC transporter [Arabidopsis thaliana] [NCBI NR]
  • gi|16604565|gb|AAL24084.1| putative ABC transporter protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15237574|ref|NP_196011.1| ATATH12; ATPase, coupled to transmembrane movement of substances / transporter [Arabidopsis thaliana] [NCBI NR]
  • pir||T48418 ABC transporter-like protein - Arabidopsis thaliana [NCBI NR]
  • ABC2 homolog 12 OS=Arabidopsis thaliana GN=ATH12 PE=2 SV=1 [Swiss-Prot]
  • ABC transporter B family member 29, chloroplastic OS=Arabidopsis thaliana GN=ABCB29 PE=2 SV=1 [Swiss-Prot]
  • (Q9LZB8) ABC transporter-like protein [athaliana3702.FASTAC.txt]
  • putative ABC transporter [Arabidopsis thaliana]gi|16604565|gb|AAL24084.1| putative ABC transporter protein [Arabidopsis thaliana]gi|7406401|emb|CAB85511.1| ABC transporter-like protein [Arabidopsis thaliana]gi|11357154|pir||T48418 ABC transporter-like [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 ABC transporter family protein, ABC-type transport protein sll1276, Synechocystis sp., PIR:S77239 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATATH12 | ATATH12 (Arabidopsis ABC transporter homolog 12); ATPase, coupled to transmembrane movement of substances | chr5:1054312-1057104 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ATATH12; ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ABC2 homolog 12 [nr-271106-contam.fasta]
  • putative ABC transporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative ABC transporter protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ABC transporter-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATATH12, ATH12 | ABC2 homolog 12 | chr5:1054313-1057105 REVERSE LENGTH=634 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • ABC transporter B family member 29, chloroplastic OS=Arabidopsis thaliana GN=ABCB29 PE=1 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 634 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    chloroplast envelope [IDA]
    Biological Process: transport [IEA]
    Molecular Function: ATPase activity, coupled to transmembrane movement of substances [ISS]
    transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFLLLTPPP CLLIPPPPLS HRRSSSLFLK HPFQPSPRPL SFCKPSALRL RANTTVNSLK  60
   61 ALETIKPYLQ SESKTVLLGW LCSCVSVVSL SQIVPRLGSF TSNLNANAAS LTKLKGECLV 120
  121 LAGLVLAKVV AYYLQQAFLW EAALNTVYKI RVFAYRRVLE RELEFFEGGN GISSGDIAYR 180
  181 ITAEASEVAD TIYALLNTVV PSAIQISVMT AHMIVASPAL TLVSAMVIPS VALLIAYLGD 240
  241 RLRKISRKAQ IASAQLSTYL NEVLPAILFV KANNAEISES VRFQRFARAD LDERFKKKKM 300
  301 KSLIPQIVQV MYLGSLSIFC VGAVILAGSS LSSSAIVSFV ASLAFLIDPV QDLGKAYNEL 360
  361 KQGEPAIERL FDLTSLESKV IERPEAIQLE KVAGEVELCD ISFKYDENML PVLDGLNLHI 420
  421 KAGETVALVG PSGGGKTTLI KLLLRLYEPS SGSIIIDKID IKDIKLESLR KHVGLVSQDT 480
  481 TLFSGTIADN IGYRDLTTGI DMKRVELAAK TANADEFIRN LPEGYNTGVG PRGSSLSGGQ 540
  541 KQRLAIARAL YQKSSILILD EATSALDSLS ELLVREALER VMQDHTVIVI AHRLETVMMA 600
  601 QRVFLVERGK LKELNRSSLL STHKDSLTSA GLVI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..634] PSI-BLAST 133.0 No description for 2hydA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • anion transmembrane-transporting ATPase activity
    		•  4.71935767060308 bayes_pls_golite062009
  • lipid transporter activity
    		•  3.78212509785335 bayes_pls_golite062009
  • transporter activity
    		•  3.71239480053329 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  3.35436118751376 bayes_pls_golite062009
  • phosphate transmembrane-transporting ATPase activity
    		•  3.20894563245332 bayes_pls_golite062009
  • inorganic anion transmembrane transporter activity
    		•  3.16975154423199 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.13960906549884 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  3.13913638619234 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.1318898376276 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  3.08390071341252 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.00745742755195 bayes_pls_golite062009
  • drug transmembrane transporter activity
    		•  2.97119034312001 bayes_pls_golite062009
  • amine-transporting ATPase activity
    		•  2.69529191205818 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  2.67957846350199 bayes_pls_golite062009
  • carboxylic acid transmembrane transporter activity
    		•  2.67815672695824 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  2.40292717311506 bayes_pls_golite062009
  • amine transmembrane transporter activity
    		•  2.29486577878686 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  2.26365379756656 bayes_pls_golite062009
    		• 2.20174656498665 bayes_pls_golite062009
  • vitamin transporter activity
    		•  2.1653565229854 bayes_pls_golite062009
  • phosphate transmembrane transporter activity
    		•  2.15147988861177 bayes_pls_golite062009
  • hydrogen ion transporting ATP synthase activity, rotational mechanism
    		•  2.1115517127743 bayes_pls_golite062009
  • transition metal ion transmembrane transporter activity
    		•  1.82177108193332 bayes_pls_golite062009
  • organic anion transmembrane transporter activity
    		•  1.76999970080179 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  1.59960772126745 bayes_pls_golite062009
  • amino acid transmembrane transporter activity
    		•  1.59627719545436 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  1.59500649635273 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  1.58971273330352 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  1.57298736672685 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  1.56976791729183 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  1.569458326493 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.52344727747862 bayes_pls_golite062009
  • hydrolase activity
    		•  1.48837078282942 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  1.4343912580786 bayes_pls_golite062009
  • binding
    		•  1.39093533263371 bayes_pls_golite062009
  • molybdate ion transmembrane transporter activity
    		•  1.28313088935613 bayes_pls_golite062009
  • molybdate transmembrane-transporting ATPase activity
    		•  1.28313088935613 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of ions
    		•  1.23799860254751 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  1.01987344666956 bayes_pls_golite062009
  • cation channel activity
    		•  0.997064416395892 bayes_pls_golite062009
  • thiamin transmembrane transporter activity
    		•  0.933872128802939 bayes_pls_golite062009
  • peptide-transporting ATPase activity
    		•  0.911425383309011 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.866395248939447 bayes_pls_golite062009
  • ATPase activity
    		•  0.839521337853266 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.809080795666113 bayes_pls_golite062009
  • copper ion transmembrane transporter activity
    		•  0.798934081014025 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.794843473528662 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.791858410488564 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
    		•  0.767424210804186 bayes_pls_golite062009
  • peptide transporter activity
    		•  0.73541731084591 bayes_pls_golite062009
  • voltage-gated cation channel activity
    		•  0.688632087597536 bayes_pls_golite062009
  • voltage-gated channel activity
    		•  0.562664200036023 bayes_pls_golite062009
  • voltage-gated ion channel activity
    		•  0.559798751382976 bayes_pls_golite062009
  • branched-chain aliphatic amino acid transmembrane transporter activity
    		•  0.442220326523999 bayes_pls_golite062009
  • potassium channel activity
    		•  0.329290830676079 bayes_pls_golite062009
  • gated channel activity
    		•  0.299411774392227 bayes_pls_golite062009
  • ATP binding
    		•  0.25041031085486 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  0.222246201013772 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.221337173375832 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  0.218174845341809 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.216758113536309 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.216707116090091 bayes_pls_golite062009
  • nucleotide binding
    		•  0.213707176772037 bayes_pls_golite062009
  • GTPase activity
    		•  0.20164416416912 bayes_pls_golite062009
  • ion channel activity
    		•  0.154779598791225 bayes_pls_golite062009
  • amino acid-transporting ATPase activity
    		•  0.147644650870465 bayes_pls_golite062009
  • channel activity
    		•  0.134817721656507 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  0.134817721656507 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  0.126911677161968 bayes_pls_golite062009
  • protein transporter activity
    		•  0.104820191623932 bayes_pls_golite062009
  • sulfate transmembrane transporter activity
    		•  0.104477131120205 bayes_pls_golite062009
  • cation-transporting ATPase activity
    		•  0.0536898657672154 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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