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Protein Overview: TRPA1_ARATH

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..275] PSI-BLAST 51.39794 Crystal structure of Tryptophan synthase alpha chain homolog BX1: a member of the chemical plant defense system

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • tryptophan synthase activity
  • 3.15663465352598 bayes_pls_golite062009
  • indole-3-glycerol-phosphate synthase activity
  • 3.12120866545322 bayes_pls_golite062009
  • catalytic activity
  • 2.81275055404078 bayes_pls_golite062009
  • phosphoribosylanthranilate isomerase activity
  • 2.655130814615 bayes_pls_golite062009
  • carbon-carbon lyase activity
  • 2.44001937916931 bayes_pls_golite062009
  • carboxy-lyase activity
  • 1.80978905789979 bayes_pls_golite062009
  • lyase activity
  • 0.9228652996943 bayes_pls_golite062009
  • imidazoleglycerol-phosphate synthase activity
  • 0.82314869965119 bayes_pls_golite062009
  • 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity
  • 0.302746738903759 bayes_pls_golite062009
  • isomerase activity
  • 0.14149405165663 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle