General Information: |
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Name(s) found: |
SMC6A_ARATH
[Swiss-Prot]
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Description(s) found:
SHOW ONLY BEST |
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Organism: | Arabidopsis thaliana |
Length: | 1058 amino acids |
Gene Ontology: |
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Cellular Component: |
nucleus
[ISS]
membrane [IEA] chromosome [IEA] |
Biological Process: |
sister chromatid cohesion
[IMP]
response to X-ray [IMP] double-strand break repair via homologous recombination [IMP] chromosome segregation [ISS] |
Molecular Function: |
two-component sensor activity
[IEA]
ATP binding [IEA][ISS] protein binding [IEA] |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MDEHGDHRQS NPFNDQQTSS GKILRIRLEN FMCHSNLEIE FGDWVNFITG QNGSGKSAIL 60 61 TALCVAFGCR ARGTQRAATL KDFIKTGCSY ALVYVELKNQ GEDAFKPEIY GDTLIIERRI 120 121 SDSTSLTVLK DHQGRKISSR KEELRELVEH YNIDVENPCV IMSQDKSREF LHSGNDKDKF 180 181 KFFYKATLLQ QVDDILQSIG TKLNSANALL DEMEKTIKPI EKEINELLEK IKNMEHVEEI 240 241 TQQVLHLKKK LAWSWVYDVD RQLKEQNEKI VKFKERVPTC QNKIDRKLGE VESLRVSLTE 300 301 KKAQVACLID ESTAMKRELE CLRQSMKKAA REKIALEEEY HHKCSNIQKI KDRVRRLERQ 360 361 IEDINEMTIR STQVEQSEIE GKLNQLTVEV EKAESLVSSL KEEENMVMEK ASAGGKEKEH 420 421 IEEMIRDHEK KQRNMNAHIN DLKKHQTNKV TAFGGDKVIN LLRAIERHHR RFKMPPIGPI 480 481 GAHVTLINGN RWASAVEQAL GNLLNAFIVT DHKDLVALRD CGKEAKYNNL KIIIYDFSRP 540 541 RLDIPRHMIP QTEHPTILSV LHSENTTVLN VLVDVSCVER HVLAENYEVG KIIAFERRLS 600 601 HLKDVFTIDG YRMFSRGPVQ TTLPPRPRRP TRLCASFDDQ IKDLEIEASR EQSEIQECRG 660 661 QKREAEMNLE GLESTMRRLK KQRTQLEKDL TRKELEMQDL KNSVASETKA SPTSSVNELH 720 721 LEIMKFQKEI EEKESLLEKL QDSLKEAELK ANELKASYEN LYESAKGEIE ALEKAEDELK 780 781 EKEDELHSAE TEKNHYEDIM KDKVLPEIKQ AETIYKELEM KRQESNKKAS IICPESEIKA 840 841 LGPWDGPTPL QLSAQINKIN HRLKRENENY SESIDDLRIM HGEKEQKIGK KRKTYKSCRE 900 901 KLKVCKDAVD SRWNKLQRNK DLLKRELTWQ FNHHLGKKGI SGNIRVSYED KTLSIEVKMP 960 961 QDATNSAVRD TRGLSGGERS FSTLCFTLAL QNMTEAPIRA MDEFDVFMDA VSRKISLDTL1020 1021 IDFALKQGSQ WMFITPHDIS MVKSHEKIKK QQMAAPRS |
SHOWING SINGLE HITS. [ Hide Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..134] | 35.522879 | Structural biochemistry of ATP-driven dimerization and DNA stimulated activation of SMC ATPases. | |
2 | View Details | [135..433] | 19.09691 | Heavy meromyosin subfragment | |
3 | View Details | [434..528] | N/A | No confident structure predictions are available. | |
4 | View Details | [529..885] | 10.09691 | Tropomyosin | |
5 | View Details | [886..1058] | 22.30103 | Sc Smc1hd:Scc1-C complex, ATPgS |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)