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Protein Overview: gi|10177678, gi|...

General Information:
Name(s) found: gi|225879156 [NCBI NR]
gi|15237559 [NCBI NR]
gi|10177678 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|225879156|dbj|BAH30648.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15237559|ref|NP_201195.1| PHD finger family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|10177678|dbj|BAB11038.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 557 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    Biological Process: metabolic process [IEA]
    regulation of transcription, DNA-dependent [ISS]
    Molecular Function: DNA binding [ISS]
    zinc ion binding [IEA]
    protein binding [IEA]
    N-acetyltransferase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSCDIVPME AELSPGAIEE WLSTVKHGKM TENGKRRSDL SIKVKRHLSA LGWVISYYNK  60
   61 RNKKEQRYKS PKGKWFYSLA KACMSCVDQD SQQQLQIVPK YDLSCLPSNI ASESSSDVSN 120
  121 QKQKKSKKRG RVEDLDVKST APEKDNHPSA DLIKIVPNFD VAKQQQQKKI IMNREGSDTA 180
  181 VFNGDQEKIR IGLNVDVIHE QQKKRRKMAS EEIRRPKMVK SLKKVLQVME KKQQKNKHEK 240
  241 ESLRFCRKDC SPDMNCDVCC VCHWGGDLLL CDGCPSAFHH ACLGLSSLPE EDLWFCPCCC 300
  301 CDICGSMESP ANSKLMACEQ CQRRFHLTCL KEDSCIVSSR GWFCSSQCNR VFSALENLLG 360
  361 SKIAVGNDGD LVWTLMRAPN EGEHYDDEQI SKLESAVEIL HQGFEPTNDV FSGRDLVEEL 420
  421 IYRKDRTGVG RGFYTVLIER KNEPITVAAV RVDKDVVEIP LVATLSSYRR SGMCRVLMDE 480
  481 LEKQMSQMGV CRLVLPAAKE VVTTWTERFG FSVMNSSERL ELVKHGMLDF VGTIMCHKFL 540
  541 QKERAENDSA EESSLTE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..238] deduced N/A No confident structure predictions are available.
    2 View Details [239..358] PSI-BLAST 12.30103 No description for 2ysmA was found.
    3 View Details [359..557] FFAS03 4.33 Histone acetyltransferase domain of P300/CBP associating factor, PCAF

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • catalytic activity
    		•  1.29304613876495 bayes_pls_golite062009
  • transferase activity
    		•  0.980842070604467 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  0.719994014502578 bayes_pls_golite062009
  • transferase activity, transferring acyl groups other than amino-acyl groups
    		•  0.599275377825458 bayes_pls_golite062009
  • acyltransferase activity
    		•  0.570805622006811 bayes_pls_golite062009
  • N-acyltransferase activity
    		•  0.152914146121788 bayes_pls_golite062009
  • acetyltransferase activity
    		•  0.147344178874961 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle