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Protein Overview: gi|15226672, gi|...

General Information:
Name(s) found: gi|4678201 [NCBI NR]
gi|25411696 [NCBI NR]
gi|15226672 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|4678201|gb|AAD26947.1| Ac-like transposase [Arabidopsis thaliana] [NCBI NR]
  • pir||A84536 Ac-like transposase [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15226672|ref|NP_179202.1| hAT dimerisation domain-containing protein / transposase-related [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 382 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: protein dimerization activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGGFNSDMK EHIRRANKGE IHCHFPSHKS QNELTELLAN DTKMMILKKI KDAKYFSVIL  60
   61 DSIPDVSRKE QMTFLIRCVD VSTCSPKIEE FFLTFLHIKD KREYTDNPGH RSDVESLTES 120
  121 ETHGIGGFEF LFGMIIWYDL LAAVNIVSKS LQFEDMDLEV AISQLGGLVT YLKNYKETGF 180
  181 EKAKVESTQI AIEMKIAPVF PKKSVKKKKQ FVEDVEKIDE SKIAEESFRI DYFINIMDQA 240
  241 IMCIEIRFEQ FQVYEQIFGF LFGVKRLKVA EDDELRTSCM KLEASLKHDV HSDVDGEDLF 300
  301 MELKLLKDVL PKEITKPVEV LKFLKIMDSC YPNTWIAYRI LLTIPVSVAL AERTFSKLKL 360
  361 IKKYLRSTMS QERLNGLALI SV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..382] PSI-BLAST 19.522879 Three-dimensional structure of the Hermes DNA transposase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.722279828632226 bayes_pls_golite062009
  • hydrolase activity
    		•  0.29272620969648 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.24934115119652 bayes_pls_golite062009
  • nuclease activity
    		•  0.239989310123501 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.80

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle