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Protein Overview: PS6AA_ARATH

General Information:
Name(s) found: PS6AA_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • 26S protease regulatory subunit 6A homolog A OS=Arabidopsis thaliana GN=RPT5A PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 424 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA][TAS]
    proteasome regulatory particle, base subcomplex [IDA]
    cytoplasm [IDA]
    Biological Process: pollen development [IGI]
    embryo sac development [IGI]
    ubiquitin-dependent protein catabolic process [TAS]
    proteasomal protein catabolic process [IGI]
    Molecular Function: ATPase activity [IGI][ISS]
    calmodulin binding [TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATPMVEDTS SFEEDQLASM STEDITRATR LLDNEIRILK EDAQRTNLEC DSYKEKIKEN  60
   61 QEKIKLNKQL PYLVGNIVEI LEMNPEDDAE EDGANIDLDS QRKGKCVVLK TSTRQTIFLP 120
  121 VVGLVDPDSL KPGDLVGVNK DSYLILDTLP SEYDSRVKAM EVDEKPTEDY NDIGGLEKQI 180
  181 QELVEAIVLP MTHKERFEKL GVRPPKGVLL YGPPGTGKTL MARACAAQTN ATFLKLAGPQ 240
  241 LVQMFIGDGA KLVRDAFQLA KEKAPCIIFI DEIDAIGTKR FDSEVSGDRE VQRTMLELLN 300
  301 QLDGFSSDER IKVIAATNRA DILDPALMRS GRLDRKIEFP HPTEEARARI LQIHSRKMNV 360
  361 HPDVNFEELA RSTDDFNGAQ LKAVCVEAGM LALRRDATEV NHEDFNEGII QVQAKKKASL 420
  421 NYYA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..424] PSI-BLAST 91.0 VCP/p97


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle