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Protein Overview: gi|15242647, gi|...

General Information:
Name(s) found: gi|15242647 [NCBI NR]
gi|10178142 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|15242647|ref|NP_198848.1| DC1 domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|10178142|dbj|BAB11587.1| CHP-rich zinc finger protein-like [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 594 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: intracellular signaling pathway [IEA]
    Molecular Function: zinc ion binding [IEA]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLVEELSDV SSPTNEANQA YSYDDDDDDD GSLTPSMVFD QIMGTSLMLP FHEHPVYNHY  60
   61 SSTGQCDGCP ELRENGLHGY NCNTCGLTVH KECAESSPEI NHPSHQRHPL MLLTHGLPQE 120
  121 AEDDKCRLCG EKVGKLVYHC SICDFSLDLF CARNPLSLVV YFRKGHEHTL TLMPRLIRFT 180
  181 CNACGLESDR SPYICAQCDF MIHEDCIYLP RVISIIRHEH RISRTYFLGS GDWKCGVCRR 240
  241 RMDGRYGAYS CSICPDYAVH SRCATRRDVW DGLELEDEPE DIEECEEPFR VVSDGVINHF 300
  301 SHREHDLRLE DGLTNRHDEN IRCRACVRPV YANTFYSCMQ CDDFILHETC ANLPRKKRHV 360
  361 LHNHQLTLYP DDNIVMDFPM LRGVFLCTAC RRLCSGFRYE CCNIKLDVRC GSISEPFFYE 420
  421 CHPHPLFQTS LDSKVCETCK EESDYVLTCM DCDYVLDFEC ATLPPTVRYK YDRHPLKLCY 480
  481 DGDKDMAGSY WCEICEKEMD QNIIFYTCES SGPTIHIECV LGDFRYVKPR LHFEFNKKKW 540
  541 EVALNGINRP GCYKCGFRCK GPFVAVSVDY DISYVCSLLC LWKGETLVYG SIRD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..115] FFAS03 2.0 Solution Structure of The C1 Domain of The Human Diacylglycerol Kinase Delta
    2 View Details [116..174] PSI-BLAST 5.0 Crystal Structure of the Human Beta2-Chimaerin
    3 View Details [175..223] PSI-BLAST 4.69897 NMR STRUCTURE OF A PROTEIN KINASE C-G PHORBOL-BINDING DOMAIN, MINIMIZED AVERAGE STRUCTURE
    4 View Details [224..358] FFAS03 2.18 Solution Structure of DC1 Domain of PDI-like Hypothetical Protein from Arabidopsis thaliana
    5 View Details [359..522] PSI-BLAST 3.30103 No description for 2ysmA was found.
    6 View Details [523..594] deduced N/A Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle