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Protein Overview: EPF1_ARATH

General Information:
Name(s) found: EPF1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|20197702|gb|AAM15214.1| predicted protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15226414|ref|NP_179684.1| EPF1 (EPIDERMAL PATTERNING FACTOR 1) [Arabidopsis thaliana] [NCBI NR]
  • Protein EPIDERMAL PATTERNING FACTOR 1 OS=Arabidopsis thaliana GN=EPF1 PE=1 SV=1 [Swiss-Prot]
  • (Q8S8I4) Predicted protein [athaliana3702.FASTAC.txt]
  • predicted protein [Arabidopsis thaliana]gi|15226414|ref|NP_179684.1| hypothetical protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: EPF1 | EPF1 (EPIDERMAL PATTERNING FACTOR 1) | chr2:8990260-8990660 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • predicted protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: EPF1 | epidermal patterning factor 1 | chr2:8983179-8983579 REVERSE LENGTH=104 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Protein EPIDERMAL PATTERNING FACTOR 1 OS=Arabidopsis thaliana GN=EPF1 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 104 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: stomatal complex development [IGI]
    stomatal complex patterning [IMP]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSLLLLAFF LSFFFGSLLA RHLPTSSHPS HHHVGMTGAL KRQRRRPDTV QVAGSRLPDC  60
   61 SHACGSCSPC RLVMVSFVCA SVEEAETCPM AYKCMCNNKS YPVP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..104] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle