YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE33539

General Information:
Name(s) found: CE33539 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00011409 status:Partially_confirmed UniProt:Q86G92 protein_id:CAD82917.1 [WormBase]
  • gi|32564391|ref|NP_871631.1| hypothetical protein T04A8.7 [Caenorhabditis elegans] [NCBI NR]
  • gi|29292182|emb|CAD82917.1| C. elegans protein T04A8.7b, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • [wormpep104.fasta]
  • CE33539 WBGene00011409 status:Partially_confirmed TR:Q86G92 protein_id:CAD82917.1 [wormpep150.fasta]
  • 33539 WBGene00011409 status:Partially_confirmed TR:Q86G92 protein_id:CAD82917.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • DNaJ domain (prokaryotic heat shock protein) (dnj-18Co) [Caenorhabditis elegans]gi|29292182|emb|CAD82917.1| Hypothetical protein T04A8.7b [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q86G92 protein_id:CAD82917.1 [wormpep115.fasta.reversed]
  • CE33539 WBGene00011409 status:Partially_confirmed UniProt:Q86G92_CAEEL protein_id:CAD82917.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE33539 WBGene00011409 status:Partially_confirmed UniProt:Q86G92_CAEEL protein_id:CAD82917.1| [wormORF-contam.fasta]
  • Hypothetical protein T04A8.7b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • T04A8.7b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE33539 WBGene00011409 status:Partially_confirmed UniProt:Q86G92 protein_id:CAD82917.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • Isoform of Q22137, Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_T04A8.7 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 606 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: carbohydrate metabolic process [IEALink to PubMed article]
    glycogen biosynthetic process [IEALink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed articleLink to PubMed article]
    post-embryonic body morphogenesis [IMPLink to PubMed article]
    trehalose biosynthetic process [IEALink to PubMed article]
    reproduction [IMPLink to PubMed articleLink to PubMed article]
    Molecular Function: 1,4-alpha-glucan branching enzyme activity [IEALink to PubMed article]
    catalytic activity [IEALink to PubMed article]
    calcium ion binding [IEALink to PubMed article]
    cation binding [IEALink to PubMed article]
    hydrolase activity, hydrolyzing O-glycosyl compounds [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSILLNIKD NWDQNANVYK KEEHGKWSIT VPAKEDGSCP IPHNSVIKIA VSRHGATHFK  60
   61 LSPWATFVTC PNPKETVIYH QNFWNPPEKY QLKEARPARP ASLRIYEAHV GISSSEGKIN 120
  121 TYREFADDVL PRIQKQGYNA IQLMAVMEHV YYASFGYQVS NFFAVSSRCG TPEDLKYLVD 180
  181 KAHSLGIFML LDVVHSHASK NVEDGLNQWD GSNGGYFHDN ARGYHNLWDS RLFDYTQTET 240
  241 LRFLLSNVRW WVEEYGFDGF RFDGVSSMIY HSHGMNDDFC GGYPMYFGLN ADTDSLVYLM 300
  301 LANDFLHKKY PFMITIAEEV SGMPGICRPV EEGGQGFDYR LAMALPDMWI KILKHTSDED 360
  361 WKIDDIVFNL ENRRYAEKHV AYAESHDQAL VGDKTIAFWL MDKEMYDFMS TDSPLTPIID 420
  421 RGLSLHKLIR LITIGLGGEA WLNFIGNEFG HPEWLDFPRV GNGESFHYAR RQFNLVDAEY 480
  481 LRYKFLNNWD REMMLLEERT GFLHKGYAYT SWKHDGDKTI VFERGGLVFV INLHPTKSFA 540
  541 DYSIGVNTPG RYRIALNSDE SKFGGHNRID NSIKFHTTDD GYAGRRHRLQ VYITCRTAIV 600
  601 LEKEDD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..606] PSI-BLAST 114.0 1,4-alpha-glucan branching enzyme, N-terminal domain N; 1,4-alpha-glucan branching enzyme; 1,4-alpha-glucan branching enzyme, central domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.81707419439683 bayes_pls_golite062009
  • protein binding
    		•  1.40303524581236 bayes_pls_golite062009
  • phosphorylase activity
    		•  0.99159540154441 bayes_pls_golite062009
  • glucosidase activity
    		•  0.766503513427695 bayes_pls_golite062009
  • hexosaminidase activity
    		•  0.763360027922833 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.687079660016821 bayes_pls_golite062009
  • sugar binding
    		•  0.52048704356718 bayes_pls_golite062009
  • chitinase activity
    		•  0.500233744020165 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.498330151821515 bayes_pls_golite062009
  • transferase activity, transferring hexosyl groups
    		•  0.266938437560648 bayes_pls_golite062009
  • beta-N-acetylhexosaminidase activity
    		•  0.263065978664289 bayes_pls_golite062009
  • ligand-gated ion channel activity
    		•  0.0325030313870961 bayes_pls_golite062009
  • ligand-gated channel activity
    		•  0.0325030313870961 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle