Protein Overview: haf-9

General Information:
Name(s) found:	haf-9 / CE33261 [WormBase]
Description(s) found: SHOW ONLY BEST	WBGene00001819 locus:haf-9 status:Partially_confirmed UniProt:Q8IA64 protein_id:CCD65799.1 [WormBase] gi\|32563727\|ref\|NP_871810.1\| HAlF transporter (PGP related) family member (haf-9) [Caenorhabditis elegans] [NCBI NR] gi\|27374445\|gb\|AAO12389.1\| Half transporter (pgp related) protein 9, isoform b [Caenorhabditis elegans] [NCBI NR] [wormpep104.fasta] CE33261 WBGene00001819 locus:haf-9 status:Partially_confirmed TR:Q8IA64 protein_id:AAO12389.1 [wormpep150.fasta] 33261 WBGene00001819 locus:haf-9 status:Predicted TR:Q8IA64 protein_id:AAO12389.1 [wormpep130-phg-ecoli-orf-rand.fasta] HAlF transporter, PGP related (haf-9) [Caenorhabditis elegans]gi\|27374445\|gb\|AAO12389.1\| Half transporter (pgp related) protein 9, isoform b [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas] CE33261 WBGene00001819 locus:haf-9 status:Predicted TR:Q8IA64 protein_id:AAO12389.1 [wormpep132.fasta] 33261 WBGene00001819 locus:haf-9 status:Partially_confirmed TR:Q8IA64 protein_id:AAO12389.1 [wormpep150-phg-orf-ecoli-rand.fasta] locus:haf-9 status:Partially_confirmed TR:Q8IA64 protein_id:AAO12389.1 [wormpep115.fasta.reversed] CE33261 WBGene00001819 locus:haf-9 status:Partially_confirmed UniProt:Q8IA64_CAEEL protein_id:AAO12389.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta] CE33261 WBGene00001819 locus:haf-9 status:Partially_confirmed UniProt:Q8IA64_CAEEL protein_id:AAO12389.1\| [wormORF-contam.fasta] Half transporter (pgp related) protein 9, isoform b [Caenorhabditis elegans] [nr-271106-contam.fasta] HAlF transporter (PGP related) family member (haf-9) [Caenorhabditis elegans] [nr-271106-contam.fasta] [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr] CE33261 WBGene00001819 locus:haf-9 status:Partially_confirmed UniProt:Q8IA64 protein_id:AAO12389.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta] CE33261 WBGene00001819 locus:haf-9 status:Partially_confirmed UniProt:Q8IA64 protein_id:CCD65799.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta] Isoform of O44897, HAlF transporter (PGP related) OS=Caenorhabditis elegans GN=haf-9 PE=1 SV=1 [CAEEL.fasta.20160308]
Organism:	Caenorhabditis elegans
Length:	674 amino acids
Gene Ontology:
Cellular Component:	Gram-negative-bacterium-type cell wall [IEA] membrane [IEA] integral to membrane [IEA] outer membrane-bounded periplasmic space [IEA]
Biological Process:	protein transport [IEA] transport [IEA] amino acid transport [IEA] nodulation [IEA] cell division [IEA] cobalt ion transport [IEA] lipid transport [IEA] D-methionine transport [IEA] phosphate transport [IEA] nitrate transport [IEA] phosphonate transport [IEA] polyamine transport [IEA] cytochrome complex assembly [IEA] peptide transport [IEA] molybdate ion transport [IEA]
Molecular Function:	ATPase activity [IEA] phosphate transmembrane transporter activity [IEA] ATPase activity, coupled to transmembrane movement of substances [IEA] nitrate transmembrane transporter activity [IEA] peptide transporter activity [IEA] molybdate ion transmembrane transporter activity [IEA] protein transporter activity [IEA] amino acid transmembrane transporter activity [IEA] cysteine-type peptidase activity [IEA] transporter activity [IEA] nucleotide binding [IEA] D-methionine transmembrane transporter activity [IEA] ATP binding [IEA] inorganic phosphate transmembrane transporter activity [IEA] nucleoside-triphosphatase activity [IEA] polyamine-transporting ATPase activity [IEA] phosphonate transmembrane-transporting ATPase activity [IEA] toxin transporter activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSLYTGGQ ALFICLAFIG LDLLVNVFGL AWNGKYFTFD NIAHWFDLAN YSFLKNPVDF  60
   61 LAVALIRDSI LLGGAVSAWA SPSGFSQVAE NVKNVVFAMM LLIVAFAPSK LLAFYEDDNI 120
  121 RLAVGDWILM IWCIFASLLL QGIWTSVLAH VTEVAAGTGD SLLFGDAEHE ERLRQEEAEK 180
  181 AAEQRETFQL LFRLLGYMGR QWKYYGMAFF FLFCYSLSRV FIPYYTGEVV TAVFGDKASY 240
  241 EKLHKTVFIM GMLSLASTVF GGLRGGSFTY AHATIDRQIR NDLFRSVVKQ EIGFFDMNKT 300
  301 GEICSRLSAD CQTMSNTLSL YMNVLTRNLT MLFGSLIFMF TLSWKLSMIT LINIPIIFLV 360
  361 NKIFGVWYDM LSEETQNSVA KANDVAEEVL SSIRTVKSFA CENYESSRFM TFLNVTLKIA 420
  421 TRKVFVVIGL IWSNELLQMG ILTIVLWYGG HLVIENKVES GLLVSFLLYQ FQLGENLREL 480
  481 GEVWNGLMQA VGASRKVFEF IDRPPRVENT GTYAPDGMTG KIEFRHVAFS YPIRPDLPIM 540
  541 EDLTFTVEPG EVVALVGPSG GGKSSCIAML EHFYEPTSGE VLIDGVPVRE YDHKFLHTKV 600
  601 ALVGQEPVLY ARSVTENIGY GLDKYDDDMV QNSAKLANAH TFIMNDTTDG YNTNVGEKGS 660
  661 QMSGVYSNSL KFKL

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

No functions predicted.

Term	Confidence	Notes
ATPase activity, coupled to transmembrane movement of substances	5.57844095962502	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	5.57813579764186	bayes_pls_golite062009
ATPase activity, coupled to movement of substances	5.57813579764186	bayes_pls_golite062009
P-P-bond-hydrolysis-driven transmembrane transporter activity	5.5689620139321	bayes_pls_golite062009
primary active transmembrane transporter activity	5.55992639965745	bayes_pls_golite062009
active transmembrane transporter activity	5.50005167063544	bayes_pls_golite062009
ATPase activity, coupled	4.98276715440477	bayes_pls_golite062009
ATPase activity	4.69795387297193	bayes_pls_golite062009
nucleoside-triphosphatase activity	4.45923622153365	bayes_pls_golite062009
pyrophosphatase activity	4.39781350157199	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides	4.38133275795019	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	4.38085303582726	bayes_pls_golite062009
transporter activity	3.71239480053329	bayes_pls_golite062009
hydrolase activity	3.14498892233323	bayes_pls_golite062009
transmembrane transporter activity	3.13960906549884	bayes_pls_golite062009
substrate-specific transporter activity	3.1318898376276	bayes_pls_golite062009
ATP binding	3.01346604299372	bayes_pls_golite062009
adenyl ribonucleotide binding	2.96271391116269	bayes_pls_golite062009
adenyl nucleotide binding	2.91131545957759	bayes_pls_golite062009
purine ribonucleotide binding	2.70262534541085	bayes_pls_golite062009
ribonucleotide binding	2.70178191749524	bayes_pls_golite062009
purine nucleotide binding	2.6583477492092	bayes_pls_golite062009
nucleotide binding	2.62374702628143	bayes_pls_golite062009
lipid transporter activity	1.74534601529986	bayes_pls_golite062009
binding	1.39093533263371	bayes_pls_golite062009
peptide-transporting ATPase activity	1.37783759788533	bayes_pls_golite062009
peptide transporter activity	1.19353064661766	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	1.08692822631118	bayes_pls_golite062009
ion transmembrane transporter activity	0.977237423302079	bayes_pls_golite062009
cation transmembrane transporter activity	0.557919489256916	bayes_pls_golite062009
hydrogen ion transporting ATP synthase activity, rotational mechanism	0.213018989352421	bayes_pls_golite062009
inorganic cation transmembrane transporter activity	0.123304946374679	bayes_pls_golite062009
protein transporter activity	0.104820191623932	bayes_pls_golite062009
metal ion transmembrane transporter activity	0.0775601177068852	bayes_pls_golite062009
motor activity	0.0492636236578701	bayes_pls_golite062009

Source: Reynolds et al. 2008. Manuscript submitted

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..176]	deduced	N/A	No confident structure predictions are available.
2	View Details	[177..674]	PSI-BLAST	116.0	No description for 2hydA was found.

Protein Overview: haf-9

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: