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Protein Overview: atg-18

General Information:
Name(s) found: atg-18 / CE30784 [WormBase]
Description(s) found:
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  • WBGene00018294 locus:atg-18 status:Confirmed UniProt:H2KYN5 protein_id:CCD64091.1 [WormBase]
  • gi|25150003|ref|NP_741577.1| AuTophaGy (yeast Atg homolog) family member (atg-18) [Caenorhabditis elegans] [NCBI NR]
  • gi|21281620|gb|AAM45377.1|AF016448_6 Atg (autophagy) related protein 18, isoform b [Caenorhabditis elegans] [NCBI NR]
  • [wormpep88.fasta]
  • CE30784 WBGene00018294 locus:tag-283 status:Confirmed TR:Q8MXJ8 protein_id:AAM45377.1 [wormpep150.fasta]
  • 30784 WBGene00018294 status:Confirmed TR:Q8MXJ8 protein_id:AAM45377.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • i-50 protein (43.3 kD) (5J110) [Caenorhabditis elegans]gi|21281620|gb|AAM45377.1| Hypothetical protein F41E6.13b [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE30784 WBGene00018294 status:Confirmed TR:Q8MXJ8 protein_id:AAM45377.1 [wormpep132.fasta]
  • 30784 WBGene00018294 locus:tag-283 status:Confirmed TR:Q8MXJ8 protein_id:AAM45377.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • status:Confirmed TR:Q8MXJ8 protein_id:AAM45377.1 [wormpep115.fasta.reversed]
  • CE30784 status:Partially_confirmed protein_id:AAM45377.1 [wormpep80.hongbin]
  • CE30784 WBGene00018294 locus:atg-18 status:Confirmed UniProt:Q8MXJ8_CAEEL protein_id:AAM45377.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE30784 WBGene00018294 locus:atg-18 status:Confirmed UniProt:Q8MXJ8_CAEEL protein_id:AAM45377.1| [wormORF-contam.fasta]
  • CE30784 WBGene00018294 locus:atgr-18 status:Confirmed TR:Q8MXJ8 protein_id:AAM45377.1 [wormpep160-contam.fasta]
  • ATG (AuTophaGy) Related family member (atgr-18) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Temporarily assigned gene name protein 283, isoform b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE30784 WBGene00018294 locus:atg-18 status:Confirmed UniProt:Q8MXJ8 protein_id:AAM45377.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE30784 WBGene00018294 locus:atg-18 status:Confirmed UniProt:H2KYN5 protein_id:CCD64091.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Isoform of O16466, AuTophaGy (Yeast Atg homolog) OS=Caenorhabditis elegans GN=atg-18 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 394 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: dauer larval development [IGILink to PubMed article]
    autophagy [IGILink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSATTSEENP DSINYIGFNQ DSKVICVGHK DGYMFYKTAD ILENNTLTYE GENLTHLGLN  60
   61 NCLIIERLFS SALMVVISQK DPRVLHVYHF TSRNIICDHR FNKSVLTVRL NRDRIVVCLE 120
  121 DCIYIYNLKD MKMMHNIMDT PTNKLGVLDL TSNPGNALIA YPGSTDTGSV HLFDAINLSS 180
  181 VSTFNAHEGT IACLKFNQEG NMIATASTKG TVIRVYSVPN GHRLFEFRRG VTRCVNIYSL 240
  241 CFSSDSKYLT SSSNTETVHV FKLEKTEGVD NKPEASTEGG GWFDAINKTF SAYMPSQVLQ 300
  301 VGELMTTERS FATAKLPGAA RSNQVSLVSH KNQQYVMAAT SDGFVYAYRL DPEGGELDLI 360
  361 KQHNIGPKSD TSRASPTSTG SGGAAKSAEA SISV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..394] PSI-BLAST 63.154902 No description for 2ovpB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle