General Information: |
|
Name(s) found: |
pal-1 /
CE27837
[WormBase]
|
Description(s) found:
SHOW ONLY BEST |
|
Organism: | Caenorhabditis elegans |
Length: | 270 amino acids |
Gene Ontology: |
|
Cellular Component: |
nucleus
[IDA][IEA]
condensed nuclear chromosome [IDA] |
Biological Process: |
embryonic development
[IMP]
ectodermal cell fate commitment [IMP] embryonic pattern specification [IMP] embryonic development ending in birth or egg hatching [IMP] muscle cell fate commitment [IMP] regulation of transcription, DNA-dependent [IEA] positive regulation of transcription from RNA polymerase II promoter [IMP] |
Molecular Function: |
transcription factor activity
[IEA]
RNA polymerase II transcription factor activity [IMP] sequence-specific DNA binding [IEA] |
Sequence: |
|
Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MSVDVKSDFS ENESSSTPSP TTVPADVTWP HYPMMPFMQP HPLREKMLQP TFDPQIYGRW 60 61 SQMGDTGFYG HPDLYPFGLP QLAANGQIPA VEAVDVKPPL SNGSSSSDSG MYPSPSDMMT 120 121 PFPSTSSGAA SSSELSAAAA AAANYQMRAA TCYQQSVWPF MDYQQFQGFS WKMPLGNNHG 180 181 KDRRSSSDGK TLPTGPGTNN VRVRTADKYR MVYSDYQRLE LEKEFHTSPF ITSDRKSQLS 240 241 TMLSLTERQI KIWFQNRRAK DRRDKQKIRL |
SHOWING SINGLE HITS. [ Hide Single Hits ]
New Feature: Upload Your Own Microscopy Data
Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..193] | 4.746997 | View MSA. No confident structure predictions are available. | |
2 | View Details | [194..270] | 22.69897 | Crystal Structure of HoxA9 and Pbx1 homeodomains bound to DNA |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)