General Information: |
|
Name(s) found: |
hda-3 /
CE18116
[WormBase]
|
Description(s) found:
Found 21 descriptions. SHOW ALL |
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Organism: | Caenorhabditis elegans |
Length: | 465 amino acids |
Gene Ontology: |
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Cellular Component: |
histone deacetylase complex
[ISS]
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Biological Process: |
negative regulation of transcription from RNA polymerase II promoter
[ISS]
chromatin modification [ISS] DNA repair [IMP] DNA protection [IMP] histone deacetylation [ISS] |
Molecular Function: |
histone deacetylase activity
[ISS]
transcription corepressor activity [ISS] |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MSLQHSKSRV SYYYDGDFGN FYYGQGHPMK PHRVRMTHSL IVNYGLYRKL NVMRPARASF 60 61 SEITRYHSDD YINFLRNVKS DNMSTFTDQM ARFSVGEDCP VFDGMYEFCQ LSCGGSLAAA 120 121 ARLNRQESEI AINWMGGLHH AKKSEASGFC YSNDIVLAIL ELLKHHKRVL YIDIDVHHGD 180 181 GVEEAFYTTD RVMTVSFHKH GEYFPGTGDL KDVGAGSGKY YALNVPLRDG VDDVTYERIF 240 241 RTIMGEVMAR FQPEAVVLQC GADSLAGDRL GVFNLTTYGH GKCVEYMKSF NVPLLLVGGG 300 301 GYTIRNVSRC WLYETAIALN QEVSDDLPLH DYFDYFIPDY KLHIKPLAAL SNFNTPEFID 360 361 QTIVALLENL KQLPHVPSVQ MQSISTSCDS IVKTFDEKLI RDHQNDDVRV TQFEEDVQVE 420 421 DSAEFYDGQE PETKNIQSMK RHASPICAAQ EEMKKNRIDG GENVA |
SHOWING SINGLE HITS. [ Hide Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..381] | 92.39794 | Crystal Structure of human HDAC8 complexed with Trichostatin A | |
2 | View Details | [382..465] | 1.10199 | View MSA. No confident structure predictions are available. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)