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Protein Overview: atf-5

General Information:
Name(s) found: atf-5 / CE06355 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00000221 locus:atf-5 status:Confirmed UniProt:Q22156 protein_id:CAA93757.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 208 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: regulation of transcription, DNA-dependent [IEALink to PubMed article]
    Molecular Function: transcription factor activity [IEALink to PubMed article]
    sequence-specific DNA binding [IEALink to PubMed article]
    protein dimerization activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYVNEQNPQ FLLYNGMHNQ THSTPQYHNH HHHHHQSPTY PQSYFNPYSH QSYQQHHLNS  60
   61 DVNFQMVPQS TSVPPDPFCS IEPMETNVQA KEQILEEIVR ECEEIERRSN SSASPASNWS 120
  121 SDEHDSQSEK SYHPYKTPEK KERKKAQNRL AATRYREKKR REKEEAMTCI EGLSVTNGKL 180
  181 KDQVSELERE IRYFKKFMTE MGMKTVTD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..115] MSA 3.462995 View MSA. No confident structure predictions are available.
    2 View Details [116..208] PSI-BLAST 13.69897 C/ebp beta


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle