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Protein Overview: abcf-1

General Information:
Name(s) found: abcf-1 / CE05663 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00006512 locus:abcf-1 status:Confirmed UniProt:Q19554 protein_id:CAA99835.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 622 amino acids

    Gene Ontology:
    Cellular Component: Gram-negative-bacterium-type cell wall [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    outer membrane-bounded periplasmic space [IEALink to PubMed article]
    Biological Process: hermaphrodite genitalia development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    protein transport [IEALink to PubMed article]
    transport [IEALink to PubMed article]
    nodulation [IEALink to PubMed article]
    reproduction [IMPLink to PubMed article]
    cell division [IEALink to PubMed article]
    cobalt ion transport [IEALink to PubMed article]
    D-methionine transport [IEALink to PubMed article]
    phosphate transport [IEALink to PubMed article]
    nitrate transport [IEALink to PubMed article]
    phosphonate transport [IEALink to PubMed article]
    polyamine transport [IEALink to PubMed article]
    cytochrome complex assembly [IEALink to PubMed article]
    molybdate ion transport [IEALink to PubMed article]
    Molecular Function: ATPase activity [IEALink to PubMed article]
    phosphate transmembrane transporter activity [IEALink to PubMed article]
    ATPase activity, coupled to transmembrane movement of substances [IEALink to PubMed article]
    nitrate transmembrane transporter activity [IEALink to PubMed article]
    molybdate ion transmembrane transporter activity [IEALink to PubMed article]
    cysteine-type peptidase activity [IEALink to PubMed article]
    transporter activity [IEALink to PubMed article]
    nucleotide binding [IEALink to PubMed article]
    D-methionine transmembrane transporter activity [IEALink to PubMed article]
    ATP binding [IEALink to PubMed article]
    inorganic phosphate transmembrane transporter activity [IEALink to PubMed article]
    nucleoside-triphosphatase activity [IEALink to PubMed article]
    polyamine-transporting ATPase activity [IEALink to PubMed article]
    phosphonate transmembrane-transporting ATPase activity [IEALink to PubMed article]
    toxin transporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDAGKKISR KEAKKAKAKE NYDKTILSMG GVVENLPEVE GDQEEHGGIG SGAELGAHFT  60
   61 VSQLSKTGTQ LAQMENSMDI KIENFDISAQ GKLLFDKASL TIVYGRRYGL VGPNGMGKTT 120
  121 LLKHIGARKL AIPSHIDLLY CEQEIQVDST SAIDTVVKSD KKRLALLEEE AKLMSEIEEG 180
  181 KTEAAERMKE VADELRDIGA DSAEPRARRI LAGLGFSKEM QEKPCTDFSG GWRMRISLAR 240
  241 ALFLEPTLLM LDEPTNHLDL NAVIWLDNYL QTWKKTLLIV SHDQGFLDSV CTDIIHLDNQ 300
  301 KLHTYRGNYT LFKKQYAQDM QVHEKNFDQQ QKQLKAMKKE GKSAKQAEEQ VKQQMANKAK 360
  361 KGGKKNAGKV NDDDDAGAPE LLQRRKEYSV KFQFPETTKL NPPVLGLHDV NFGYGKDVLF 420
  421 KKLNFGVDMD SRIAIVGPNG VGKSTLLKLL IGKIDPNDGE LRKHRTLRIG WFDQHANEAL 480
  481 NGEQTPVEFL CTKFNIDYQE ARKQLGTTGL AAHAHTVKIK DLSGGQKSRV ALCNLALGGP 540
  541 DIIILDEPTN NLDIESIDAL AEAIRDFNGG VVMVTHDERL VVRTDCNLWV VENQGIDEID 600
  601 GDFEDYKKEV LDALGEALVS KK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..77] deduced N/A No confident structure predictions are available.
    2 View Details [78..384] PSI-BLAST 34.69897 No description for 2iw3A was found.
    3 View Details [385..622] FFAS03 5.18 No description for 2ihyA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle