General Information: |
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Name(s) found: |
snu66 /
SPAC167.03c
[Sanger Pombe]
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Description(s) found:
SHOW ONLY BEST |
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Organism: | Schizosaccharomyces pombe |
Length: | 649 amino acids |
Gene Ontology: |
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Cellular Component: |
nucleus
[IDA]
U4/U6 x U5 tri-snRNP complex [ISS] spliceosomal complex [IC] |
Biological Process: |
RNA splicing, via transesterification reactions
[ISS]
nuclear mRNA splicing, via spliceosome [IMP] |
Molecular Function: |
molecular_function
[ND]
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Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MSGNSGASES ISIEETNRIR ISLGLKPLDI SEEKPQKELS DASVKSSYVD QEQQAYENWK 60 61 KQEQEEINRK KEEELKSKFE KLRQKNERRR RTQGKTLAET LAEEDDQIDA NDTRAWILKM 120 121 RNSSLNKNGN GLNFEAKNDA PRRSTLHSQN AGPNVNSSLE GMKIAHGFQD LNKNDGLVLT 180 181 LKDADILDED NHDLLENVEM VQRKTKNERK EDNPYKPYED ENDFLQQSEA DQPSEDTFTT 240 241 IGPQNSLTVN STIEKHKSDN KKTFGTLVSF VEPTITGSEQ SDYRQIKIKK SKKKKSKSDR 300 301 RKRLVELDAE NENENDPSDF VLPNGQSNSD LSVEQDSAIF KEQKKMKIQK RMRELETQSF 360 361 ADDDDLQQSI AMQRRLAQKR AKILKPEDVA EQLQNAEEVT DMTDSDTASG LIFDDTRAFV 420 421 NSIKETENRE ALGSINEQAF EDSKDLNDTN SITGSSPTEE SNALVEDTSV DISATLEEAN 480 481 TQQENAEDEP LVSDNVGAVL SLLRNKGVIK VSDEAKEKIQ KEEEYNKWFA RKQQARVELE 540 541 EQRRKKKEQD RLSGKFEKMT QKEREQYAKK ENERWDKKIA EIELEQFHDY KPQVDIKYVD 600 601 EFGVELGPKE AYKYLLSHQF HGKGSGKAKT EKRLRRIVEK EREERKPIF |
SHOWING SINGLE HITS. [ Hide Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..417] | 19.30103 | Heavy meromyosin subfragment | |
2 | View Details | [418..521] | 5.69897 | Tropomyosin | |
3 | View Details | [522..649] | 2.239996 | View MSA. No confident structure predictions are available. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)