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Protein Overview: SPAC823.12

General Information:
Name(s) found: SPAC823.12 [Sanger Pombe]
Description(s) found:
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  • gi|7708610|emb|CAB90157.1| zinc finger protein, HOPs complex subunit Pep5/Vps11 (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|74625281|sp|Q9P6N4.1|PEP5_SCHPO RecName: Full=Vacuolar membrane protein pep5; AltName: Full=Vacuolar protein sorting-associated protein 11; AltName: Full=Carboxypeptidase Y-deficient protein 5 [NCBI NR]
  • gi|19114751|ref|NP_593839.1| zinc finger protein Pep5/Vps11 (predicted) [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • zinc finger protein Pep5/Vps11 [Sanger Pombe]
  • Vacuolar membrane protein pep5 OS=Schizosaccharomyces pombe GN=pep5 PE=2 SV=1 [Swiss-Prot]
  • PUTATIVE PERIPHERAL VACUOLAR MEMBRANE PROTEIN; PUTATIVE VACUOLAR BIOGENESIS PROTEIN; 7 FOLD REPEAT DOMAIN; RING FINGER; SIMILAR TO S. CEREVISIAE PEP5: Q9P6N4; [pompepVF.fasta]
  • PUTATIVE VACUOLAR BIOGENESIS PROTEIN; YEAST END1 HOMOLOG: Q9P6N4; [pompepV13]
  • Putative vacuolar biogenesis protein, yeast end1 homolog [pompep4896]
  • |||putative peripheral vacuolar membrane protein [pompepnew.fasta]
  • SPAC823.12 protein [4896.FASTAC]
  • |||involved in intracellular protein transport (predicted)|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • putative vacuolar biogenesis protein; yeast end1 homolog [Schizosaccharomyces pombe]gi|7708610|emb|CAB90157.1| SPAC823.12 [Schizosaccharomyces pombe] [nrdb_11152004_Chlamydomonas]
  • |||zinc finger protein|Schizosaccharomyces pombe|chr 1|||Manual [pompep2242005.fasta]
  • (Q9P6N4) Putative vacuolar biogenesis protein, yeast end1 homolog [pompep4896_normal_reversed]
  • |||zinc finger protein, HOPs complex subunit Pep5/Vps11 |Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPAC823.12 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPAC823.12 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • |vps11||HOPs complex subunit Pep5/Vps11 |Schizosaccharomyces pombe|chr 1|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
  • E3 ubiquitin-protein ligase pep5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vps11 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 906 amino acids

    Gene Ontology:
    Cellular Component: fungal-type vacuole membrane [ISS]
    cytosol [IDALink to PubMed article]
    HOPS complex [ISSLink to PubMed article]
    Biological Process: vesicle docking during exocytosis [ISSLink to PubMed article]
    late endosome to vacuole transport [ISSLink to PubMed article]
    vacuole fusion, non-autophagic [ISSLink to PubMed article]
    intracellular protein transport [IEA]
    Golgi to endosome transport [ISSLink to PubMed article]
    protein ubiquitination [ISSLink to PubMed article]
    Molecular Function: ubiquitin-protein ligase activity [ISSLink to PubMed article]
    zinc ion binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTFIKNWKR ITLFQVKAIE ENIDRLTSSF SSNGELVVFA TAFGDVSIYN SSFKSLQSIK  60
   61 VEDESSIQQI LWLDNKTFLL FSNVEGGTGT NSTVIIYAFS QADENEPPQF VLVTTHKFSI 120
  121 NESPYPIIAV SQSPIDKTIA CGFGGGLVSC YHGNPLRERG IKNSYSHNLG EPITGLTYLD 180
  181 DQSSVLFIAT TNKTYSLSGK SLSCLDNTGV SLNCSSSCKT TPLQSREKNS SSFVCTRSSG 240
  241 LTFYDSKREK ICFTFPGEKH YMTVMGSILA LCYTPTLGTD SSTNEGLKKS FSSSSSIRKA 300
  301 DASRNPAFPP RLLLVDLSRN LIVWEGHLKD VAVSILPLKH GFLVVTADDN VFELKRITLQ 360
  361 EEISLLCQKM MYNLAISLAK KENMDIEFRE SLMRDYASFL FRRGDFSASM DWYIRSIKSI 420
  421 DIPSVCLEFL KAQEIKQLIR LLEELIKTGL ATSDHRLLLL SCYVEIHDSP SIRKLIDIGE 480
  481 IDFDQAFKIC YDSNLLDEAK HLAIRFNNNE RVLDVLVESE QYSEALRFFE SLPPSNLLPL 540
  541 LLKYGRVLLD KLPEKTTNIF IQFYSNSHRG DLSTSESKGE LKTAKSLRQT YLSLLPYAQV 600
  601 ANFSLPPSLY EISPSQEENQ RAALFSEDVS YTAPSPQTCF HIFLNHNSEL ISFLEGILPN 660
  661 ASPNYKTLIN TCLFEAYIRE SFASSNVEKQ EFWQEKSNSL LKKVEKNVDL NAVFLISQIL 720
  721 GFDDGVRFVQ GKSGQTLDIF RSFCQQNDIE RALKMVRVHG PDQQELYIMM LNCFASLENV 780
  781 DSWYQDINEI VNIIVSQRLI SPTQLLDILG KSVNIKLEHI SDSMQSVLDN YRESISKQNE 840
  841 AIEMGKRDIE EITSQLSILR TRAFVVQESK CSTCGIDLEL PMVHFRCGHS YHQRCVEDEC 900
  901 IRCRWL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..843] PSI-BLAST 111.0 Clathrin D6 Coat
    2 View Details [844..906] FFAS03 2.4 Solution Structure of the Ring-H2 Finger Domain of Mouse Deltex Protein 2


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle