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Protein Overview: lub1

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..84] PSI-BLAST 64.522879 No description for 2ovpB was found.
2 View Details [85..213] PSI-BLAST 4.154902 Surface layer protein
3 View Details [214..544] PSI-BLAST 11.69897 Crystal Structure analysis of the beta-propeller protein Ski8p
4 View Details [545..713] Pfam 6.585027 No description for PF08324.2 was found. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
3
Term Confidence Notes
  • ubiquitin-protein ligase activity
  • 3.10232773079579 bayes_pls_golite062009
  • small conjugating protein ligase activity
  • 2.89805111479917 bayes_pls_golite062009
  • binding
  • 2.42570478946173 bayes_pls_golite062009
  • protein binding
  • 2.26925404328312 bayes_pls_golite062009
  • acid-amino acid ligase activity
  • 2.01595241503145 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 0.900963766598159 bayes_pls_golite062009
  • nucleic acid binding
  • 0.879332537553732 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
  • 0.734230328744066 bayes_pls_golite062009
  • actin binding
  • 0.708446291495757 bayes_pls_golite062009
  • histone binding
  • 0.685319917508843 bayes_pls_golite062009
  • transcription regulator activity
  • 0.579815310385678 bayes_pls_golite062009
  • histone methyltransferase activity
  • 0.311523647180993 bayes_pls_golite062009
  • DNA binding
  • 0.296423033247139 bayes_pls_golite062009
  • protein kinase activity
  • 0.229242350006544 bayes_pls_golite062009
  • chromatin binding
  • 0.145491963066342 bayes_pls_golite062009
  • phospholipase A2 activator activity
  • 0.0696962213283392 bayes_pls_golite062009
    4 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle