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Protein Overview: SPAC25B8.06c

General Information:
Name(s) found: SPAC25B8.06c [Sanger Pombe]
Description(s) found:
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  • gi|74625934|sp|Q9UTB2.1|SYSM_SCHPO RecName: Full=Seryl-tRNA synthetase, mitochondrial; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; AltName: Full=Serine--tRNA ligase; Short=SerRS [NCBI NR]
  • gi|6469293|emb|CAB61772.1| mitochondrial serine-tRNA ligase [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19115378|ref|NP_594466.1| serine-tRNA ligase [Schizosaccharomyces pombe] [NCBI NR]
  • pir||T50193 probable seryl-trna synthetase [imported] - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • serine-tRNA ligase [Sanger Pombe]
  • Seryl-tRNA synthetase, mitochondrial OS=Schizosaccharomyces pombe GN=dia4 PE=2 SV=1 [Swiss-Prot]
  • SERYL-TRNA SYNTHETASE: Q9UTB2; [pompepVF.fasta]
  • Seryl-tRNA synthetase [pompep4896]
  • |||seryl-tRNA synthetase [pompepnew.fasta]
  • SPAC25B8.06c protein (EC 6.1.1.11) [4896.FASTAC]
  • |||serine-tRNA ligase (predicted)|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • seryl-trna synthetase [Schizosaccharomyces pombe]gi|6469293|emb|CAB61772.1| SPAC25B8.06c [Schizosaccharomyces pombe]gi|11271519|pir||T50193 probable seryl-trna synthetase [imported] - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • |||serine-tRNA ligase|Schizosaccharomyces pombe|chr 1|||Manual [pompep2242005.fasta]
  • (Q9UTB2) Seryl-tRNA synthetase [pompep4896_normal_reversed]
  • |||mitochondrial serine-tRNA ligase|Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPAC25B8.06c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPAC25B8.06c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
    • Organism: Schizosaccharomyces pombe
    Length: 454 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed article][ISSLink to PubMed article]
    Biological Process: mitochondrial translation [RCALink to PubMed article]
    seryl-tRNA aminoacylation [ISSLink to PubMed article]
    Molecular Function: ATP binding [ISSLink to PubMed article]
    serine-tRNA ligase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQLLYLRTF STHTSYLRSS WQAILNYKYI YQNAEAVQRN CINRNLQAIA ETVPKIRSLI  60
   61 DEKESLKNEF FPLLSLKKEI TLQIERCSDP NERGKLVNEA KGLKKKTEEY NKIISKVTND 120
  121 LYQYCLAVPN TTLPTVPVGP EDKAVVVQKI GSPLVKKTGS LKDHLQIANE GINLEDAAQA 180
  181 SGHSFCYTTG DIALLEMAIT NYAMDFAISK GWCPVIPPTI VRTDIALACG FQPRDEEGQQ 240
  241 IYELDSYTSP LVSSPKQCLI GTAEISLAAL GFKKTFNNFT ERKVVGVSRA YRREAGARGK 300
  301 ENRGLYRLHE FTKVELFAWT HPSRSSEMFN EIVNFQKEFV ETLKIPARIL NMPTAELGSS 360
  361 ASQKYDIEAW MPARQSYGEI TSASNCLEYQ ARRLLTRYRN DKDSGFVHTL NGTAAAIPRL 420
  421 IIAILENHQQ EDGTVKVPET LVPYIHKEYL FKAK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..454] PSI-BLAST 107.0 No description for 2dq3A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle