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Protein Overview: SPAC3F10.17

General Information:
Name(s) found: SPAC3F10.17 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • ribosome biogenesis protein Ltv1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 386 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    preribosome, small subunit precursor [ISSLink to PubMed article]
    Biological Process: ribosomal small subunit export from nucleus [ISS]
    ribosome biogenesis [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKKKFVNKN KAQTFHLVHR SQRDPQYHDE NATERVLVSA ETLNKTARRL NRQTLDEEYG  60
   61 STIRPNEGEA ANYGIYFDDT EYDYMQHLRN IGNEDATWVE APATRKTQDK QKKQQIQLRD 120
  121 QPSILPQEVL PSEVELERTY QDQQSVPDAI SGFQPDMDPR LREVLEQLEH SDINDEETSD 180
  181 FDEEFEKLVA SGKADESEFY AQPFVEEGEK DYDEAAAAKA GKSEWEIEFE KFKLEQKKQP 240
  241 DVASSDGDFS DEPESEERDE VPELVSSSKS KSKTKRKART ALSSVSMSSS ALFRNEGLTL 300
  301 LDDRFDKVEE EYTPIKDERE LIDPDQKDVF DLVNDNQFND IMDEFLVSYG PTLGRKKAPS 360
  361 RMSNSKKKSS LEELDNVRKM LGRARI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..49] MSA 1.02599 View MSA. No confident structure predictions are available.
    2 View Details [50..211] deduced N/A No confident structure predictions are available.
    3 View Details [212..386] MSA 2.025981 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle