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Protein Overview: spn5

General Information:
Name(s) found: spn5 / SPAC24C9.15c [Sanger Pombe]
Description(s) found:
Found 23 descriptions.
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  • septin Spn5 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 464 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    septin complex [IEA]
    Biological Process: meiosis [RCALink to PubMed article]
    Molecular Function: GTP binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSSNLSSSM PQEGQLKLTE EAIITIKQVD ESSAKRSVSN ESRKSKDVTR KEQIASDQQG  60
   61 DDQCPQSDTA KDKKTEFKQD EVPNSNGKSI PTFHPCNNIG INDFNHQHYS RVCRNGIDIN 120
  121 LIVVGESSLG KTTFVNSFLQ SNDTNFRPKK TMDFVEHKAT LSDGDQKFNL TIVDTPGFGD 180
  181 KSDNSNCWRP IATNLLHRLN AYFQNEVKMD RETSEIDSRI HGCLFFINPN GHRLQPLEIY 240
  241 IMKKIDQFVN IIPVIGKADT MTSDELNHFK KRVIADMVRE KIRYFREPHN EKKAKIPIPF 300
  301 AIVGAGAPIE HDGKCIRGRA YPWGLVDIDD PKQSDFCQLR NFLLYTHIEG LKHKTHKLIY 360
  361 DTFRTEKLVA LNATPGSQFI SAEEMNQKYI SEQTQLVEEA LTKVMKEKYR EKENNLELLE 420
  421 TNLKTHHKDY KHALKKRITA LEEEKNRLIK EIGPEKVKKA GILA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..91] PSI-BLAST 19.522879 Structure of the GTP-binding protein TrmE from Thermotoga maritima
    2 View Details [92..464] PSI-BLAST 58.69897 No description for 2qagC was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle