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Protein Overview: sep1

General Information:
Name(s) found: sep1 / SPBC4C3.12 [Sanger Pombe]
Description(s) found:
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  • pir||T40493 hnf-3/forkhead transcription factor homolog SPBC4C3.05 - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|2832885|emb|CAA16826.1| fork head transcription factor Sep1 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19113093|ref|NP_596301.1| fork head transcription factor Sep1 [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • gi|15214272|sp|O43058.1|SEP1_SCHPO RecName: Full=Forkhead protein sep1 [NCBI NR]
  • fork head transcription factor Sep1 [Sanger Pombe]
  • Forkhead protein sep1 OS=Schizosaccharomyces pombe GN=sep1 PE=1 SV=1 [Swiss-Prot]
  • HNF-3/FORK HEAD TRANSCRIPTION FACTOR HOMOLOG: O43058;P79006; [pompepVF.fasta]
  • HNF-3/FORK HEAD TRANSCRIPTION FACTOR HOMOLOGUE: O43058;P79006; [pompepV13]
  • Forkhead protein sep1 [pompep4896]
  • |sep1||fork head domain [pompepnew.fasta]
  • |sep1||fork head domain|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • hnf-3/fork head transcription factor homologue. [Schizosaccharomyces pombe]gi|2832885|emb|CAA16826.1| sep1 [Schizosaccharomyces pombe]gi|15214272|sp|O43058|SEP1_SCHPO Forkhead protein sep1gi|7490643|pir||T40493 hnf-3/forkhead transcription factor homol [nrdb_11152004_Chlamydomonas]
  • (O43058) Forkhead protein sep1 [pompep4896_normal_reversed]
  • |sep1||fork head transcription factor Sep1|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPBC4C3.12 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPBC4C3.12 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • Forkhead protein sep1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sep1 PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 663 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    transcription factor complex [ICLink to PubMed article]
    Biological Process: regulation of cell separation during cytokinesis [IMPLink to PubMed article]
    regulation of transcription, mitotic [IGILink to PubMed article][IMPLink to PubMed article]
    gene-specific transcription from RNA polymerase II promoter [RCALink to PubMed article]
    Molecular Function: transcription factor activity [TASLink to PubMed article]
    specific RNA polymerase II transcription factor activity [RCALink to PubMed article]
    sequence-specific DNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFNSTNPYY FTHEKNLNNA SKYSELPIAY QEIPLQSLPP YPKVASKLKG VVAGGKENNI  60
   61 ASFQKPSSKA TRPYIPSYTR LTYSVPPLPI PPPSEQSLDT IIYRNPSVSS SQSQEPEEFF 120
  121 LPLDDGKKPP YSYAMLIGMS IIRSPDRRLT LSAIYDWISN TFSFYNKSNN GWQNSIRHNL 180
  181 SLNKAFMKIE RPRNLPGKGH FWSIRPGHEE QFLKLKLRKP GVNSRPAPPV QDVTSSTKYG 240
  241 SSTGSSGFNT FNTSPHIFNQ RHQYLQNYYT ASLTNIPTIS NVNATNFHPL HSQQPYVDTP 300
  301 GIDAPSDLEA KFSDLGVSSV VSVTSPLQSC TNSPSPPLSS PASSASPSES LRNESLGIKS 360
  361 AKSLGLNKDD APVEGPPVSH LEKDVETPSV HDSVLGFNDT VTNLGKKGLK DGTTNTLQIP 420
  421 AVRLPSLPSS PTIKNPSGLL LKRSNSIDFP TPPKALCPKL FCFRDDIVAD DYTKFSLLSP 480
  481 IRSDMSGISA SPNTNLKEHR TRILQMLATP DAKQLSSLTS SDAEFWSVTP LKSSILRNGD 540
  541 ASKQVTLSES PKGDSLLDGG SLSYFTNNIS SVAGLETPSK LPMSKSFDTF EDDFLDPMDM 600
  601 LSFENHFSDF NSNRKVSPVK REVRRKYISS ATTIHSSAAQ DDTYLPSPTK RKMPLLRQTS 660
  661 TLF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..108] deduced N/A No confident structure predictions are available.
    2 View Details [109..236] PSI-BLAST 40.09691 Adipocyte-transcription factor FREAC-11 (s12, fkh-14)
    3 View Details [237..402] deduced N/A No confident structure predictions are available.
    4 View Details [403..523] MSA 7.239991 View MSA. No confident structure predictions are available.
    5 View Details [524..663] deduced N/A Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle