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Protein Overview: elf1

General Information:
Name(s) found: elf1 / SPAC3C7.08c [Sanger Pombe]
Description(s) found:
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  • pir||T38694 probable translation elongation factor - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|26393280|sp|O14134.1|ELF1_SCHPO RecName: Full=mRNA export factor elf1 [NCBI NR]
  • gi|2462683|emb|CAB16738.1| AAA family ATPase ELf1 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19114521|ref|NP_593609.1| AAA family ATPase ELf1 [Schizosaccharomyces pombe] [NCBI NR]
  • AAA family ATPase ELf1 [Sanger Pombe]
  • mRNA export factor elf1 OS=Schizosaccharomyces pombe GN=elf1 PE=1 SV=1 [Swiss-Prot]
  • NON-TRANSPORTER GROUP OF THE ATP-BINDING CASSETTE (ABC) FAMILY; SIMILAR TO S. CEREVISIAE NEW1: O14134; [pompepVF.fasta]
  • MEMBER OF THE NON-TRANSPORTER GROUP OF THE ATP-BINDING CASSETTE (ABC) SUPERFAMILY; SIMILAR TO S. CEREVISIAE NEW1: O14134; [pompepV13]
  • mRNA export factor elf1 [pompep4896]
  • |elf1||AAA family ATPase [pompepnew.fasta]
  • |elf1||AAA family ATPase|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • putative translation elongation factor [Schizosaccharomyces pombe]gi|2462683|emb|CAB16738.1| SPAC3C7.08c [Schizosaccharomyces pombe]gi|26393280|sp|O14134|ELF1_SCHPO mRNA export factor elf1gi|7493086|pir||T38694 probable translation elongation factor - [nrdb_11152004_Chlamydomonas]
  • (O14134) mRNA export factor elf1 [pompep4896_normal_reversed]
  • |elf1||AAA family ATPase ELf1|Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPAC3C7.08c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPAC3C7.08c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • |elf1||AAA family ATPase Elf1|Schizosaccharomyces pombe|chr 1|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
  • mRNA export factor elf1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=elf1 PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 1057 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    cytoplasm [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    protein complex [RCALink to PubMed article]
    chromatin [IEA]
    Biological Process: mRNA export from nucleus [IGILink to PubMed article]
    chromatin assembly or disassembly [IEA]
    poly(A)+ mRNA export from nucleus [IGILink to PubMed article]
    Molecular Function: ATPase activity [IDALink to PubMed article]
    ATP binding [IDALink to PubMed article]
    chromatin binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSSVLIQGY EEDDVLKLLQ ELLDAETSQS CADVGKKIAQ LFSNDNPLVT LKTTGFLDGL  60
   61 ERAARNKKSG FHREAAMIGF ATVIKNLGTP SEVVFLPYLP TILDSFSDRG EVVRQAAKMA 120
  121 AQALLDCLPA GAVETRLIPS LISYLDDSSI KWPSKVAALQ LLGSLASSSP KAVADYMAAL 180
  181 IPCIKERMHD TKPEISRAAI TCMLNLCSVV ENNDIIPHIP KLVDCMAHPE TLEACIKDLS 240
  241 ATTFVATVES VALAVLVPIL KRALAQRSQS MLRLTVIITD NLCKLVPDPA EASDFLPELI 300
  301 PDVERIAQTA AMPEVRALAS HALTTLNKAA AAQAAKAANN SEKQALDSAC KELREAVLKN 360
  361 TSVPHELANS IIDYVCDALA ALYKSNNFDK DKWTSQLGVL YLSPLVGEEL ASQISSKIYD 420
  421 DLHAFYKSLN SVDGISNLTI EEEELVNTDF SLAYGGRLLL SHTNLHLYRG HRYGVVGHNG 480
  481 CGKSTLLRAI GDYKVENFPS PDEVKTCFVA HSLQGEDTSM AILDFVAQDK ALLTMNVTRQ 540
  541 EAADALHSVG FTAEMQENPV ASLSGGWKMK LELARAMLQK ADILLLDEPT NHLDVANIAW 600
  601 LEAYLTSQKN ITCLIVSHDS SFLDHVCTDI IHYEGVKNQA KKLGYYQGNL SAFVKVKPEA 660
  661 KSYYTLTATN EKFVFPPPGI LTGVRSNTRL ILKMTNASYT YPNAKKKSLD NVTVGLSLSS 720
  721 RVAILGPNGA GKSTLIKVLI GEVIPQEGKV FKHPNLRVGY VAQHAFHHLD QHLEKTPSQY 780
  781 IQWRYAGGQD REVSEKESRK LTEEDRAQLQ RDITVNGERR RVEALIGRQK LKKSFQYEIK 840
  841 WFGKPHKYNT WVSREILLEN GFQKFVQAFD DMESSREGLG FRELIPEDIR AHFEDVGLPG 900
  901 DIADYSPISS LSGGQKVKVV IAACLWNNPQ LLVLDEPTNF LDRDALGGLA VAIRDWEGGV 960
  961 VMISHNEEFV SALCPEHWHV EAGKVTGKGK TAVDDGKFED LSEKDLKKIE AKATKKKKLT1020
 1021 RNEIKAKERR ARERELAWLQ SPKGTEKPKS FFSDDEE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..1057] PSI-BLAST 96.30103 No description for 2ix8A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle