General Information: |
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Name(s) found: |
prp43 /
SPBC16H5.10c
[Sanger Pombe]
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Description(s) found:
Found 21 descriptions. SHOW ALL |
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Organism: | Schizosaccharomyces pombe |
Length: | 735 amino acids |
Gene Ontology: |
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Cellular Component: |
nucleus
[IDA]
mitochondrion [ISS] spliceosomal complex [ISS] 90S preribosome [ISS] |
Biological Process: |
RNA splicing, via transesterification reactions
[ISS]
spliceosome disassembly [ISS] ribosome biogenesis [TAS] rRNA processing [ISS] |
Molecular Function: |
ATP binding
[ISS]
ATP-dependent RNA helicase activity [ISS] |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MEPAQKKLRQ ESKNPYLAHL NNGDDSEEVV SSKGLTRRAT TVAQAAKAEE GPNNFFNDKP 60 61 FSQNYFKILE TRRELPVYQQ REEFLKIYHE NQIIVFVGET GSGKTTQIPQ FVLYDELPHL 120 121 TNTQIACTQP RRVAAMSVAK RVADEMDVDL GEEVGYNIRF EDCSGPNTLL KYMTDGMLLR 180 181 EAMTDHMLSR YSCIILDEAH ERTLATDILM GLMKRLATRR PDLKIIVMSA TLDAKKFQKY 240 241 FFDAPLLAVP GRTYPVEIYY TQEPERDYLE AALRTVLQIH VEEGPGDILV FLTGEEEIED 300 301 ACRKITLEAD DLVREGAAGP LKVYPLYGSL PPNQQQRIFE PTPEDTKSGY GRKVVISTNI 360 361 AETSLTIDGI VYVVDPGFSK QKIYNPRIRV ESLLVSPISK ASAQQRAGRA GRTRPGKCFR 420 421 LYTEEAFRKE LIEQTYPEIL RSNLSSTVLE LKKLGIDDLV HFDYMDPPAP ETMMRALEEL 480 481 NYLNCLDDNG DLTPLGRKAS EFPLDPNLAV MLIRSPEFYC SNEVLSLTAL LSVPNVFVRP 540 541 NSARKLADEM RQQFTHPDGD HLTLLNVYHA YKSGEGTADW CWNHFLSHRA LISADNVRKQ 600 601 LRRTMERQEV ELISTPFDDK NYYVNIRRAL VSGFFMQVAK KSANGKNYVT MKDNQVVSLH 660 661 PSCGLSVTPE WVVYNEFVLT TKSFIRNVTA IRPEWLIELA PNYYDLDDFD NNKEVKSALQ 720 721 KVYQMAARSK KNARR |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..442] | 61.69897 | No description for 2j0qA was found. | |
2 | View Details | [443..489] | 10.30103 | No description for 2d7dA was found. | |
3 | View Details | [490..583] | 1.13 | No description for 2v8oA was found. | |
4 | View Details | [584..735] | 29.886057 | No description for PF07717.7 was found. No confident structure predictions are available. |
Functions predicted (by domain):
# | Gene Ontology predictions | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
1 |
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2 | No functions predicted. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
3 | No functions predicted. | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
4 | No functions predicted. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)