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Protein Overview: dec-1-PA

General Information:
Name(s) found: dec-1-PA / FBpp0071097 [FlyBase]
Description(s) found:
Found 21 descriptions.
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  • The gene defective chorion 1 is referred to in FlyBase by the symbol Dmel\dec-1 (CG2175, FBgn0000427). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:7761229..7767255. It has the cytological map location 7C1. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: structural constituent of chorion. There is experimental evidence that it is involved in the biological process</span>: chorion-containing eggshell formation. 53 alleles are reported. The phenotypes of these alleles are annotated with: vitelline membrane; chorion; egg; dorsal appendage; endochorion. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 1590 amino acids

    Gene Ontology:
    Cellular Component: extracellular region [IDA]
    chorion [IEA]
    Biological Process: eggshell chorion assembly [NAS][TAS]
    chorion-containing eggshell formation [IMP][TAS]
    Molecular Function: structural constituent of chorion [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLFSLLPLL ALLVVQAAGQ SEVTSDDPAT DAGSTTNSTT DTKPRIPSQD EILGQMPSIN  60
   61 PIRTGNPQMD AFYMMFPALG SLLKWGSLFP AYSILGAIPD NLQPTAAASK VVLVLADDAT 120
  121 AKTRVARQNP PPNPLGQLMN WPALPQDFQL PSMDLGPQVG SFLAQLPAMP TVPGLLGAAA 180
  181 PVPAPAPAPA AAPPPAPAPA ADPPAAPVPD APQPAILGQA ALQNAFTFFN PANFDASSLL 240
  241 GQSVPTFAPP NLDFVAQMQR QFFPGMTPAQ PAAAGTDAQA SDISEVRVRP EDPYSQEAQM 300
  301 KIKSALEMEQ ERQQQAQVKD QEQVPLLWFR MPTTQNQDAT EEKTLEDLRV EAKLRAFERQ 360
  361 VIAELRMLQK IELMAKQMRS SAAAQNGDSP YRISYPLSRT PIHKITRADI EQALRDDYVR 420
  421 RLVNKEAQRR ARNSGINTQK ANALKRQAKS QDQTLSKEDI VQIMAYAYRM ANEQMESEKG 480
  481 KQDKVYAAYR TEQNPMMMQQ RQWSEEQAKI QQNQQQIQQN PMMMQQRQWS EEQAKIQQNQ 540
  541 QQIQQNPMMM QQRQWSEEQA KIQQNQQQIQ QNPMMMQQRQ WSEEQAKIQQ NQQQIQQNPM 600
  601 MVQQRQWSEE QAKIQQNQQQ IQQNPMMMQQ RQWSEEQAKI QHDQQMAQQM AQQGLMMTEQ 660
  661 RQRQWSEDQA KIQQAQQMAQ QTPMMMPQMQ QRQWTEDPQM VQQMQQRQWA EDQTRMQMAQ 720
  721 QNPMMQQQRQ MAENPQMMQQ RQWSEEQTKI EQAQQMAQQN QMMMQQMQQR QWSEDQAQIQ 780
  781 QQQRQMMQQT PMMMKERQWA EENPQSVQQQ GPMMMQQQMP SMMQREVEDE DNKAEDDLVG 840
  841 EAGPQMPENE GTARHKVDAL GVGGNKRKKS KSKSAPPTVI NYYYAAPQRP VVQSYGTSYG 900
  901 GGGYGSNAYG VPRPVNSYQS QGYRAAVGND EVDEMLRQHQ TMARTINPKQ PGEVGGSESQ 960
  961 KSNSNPPTTL TPAPQEQPQE HRVHKRLAHF HRFGREAGLN ATTSKGCGCG RLDCLCGRSC1020
 1021 RCGRRGLESR VVSSRTSGTC QCKASHRNKR SVEYGTLETI DEGSLNELRR EYKLGLKEIT1080
 1081 LSPDEDPAEA LMRYNAASIR EALERASMEP LEIGGDQYEE DAQQEPMEEE QLQHDPNTEP1140
 1141 QYNHKDFVRL TTSTASPITS TTEAATPTGS DSTSEATVTP EVTTTTSTST TTTTESTKDE1200
 1201 GLDMQQDSQA EAESSHVTKS ISKQEAEIHQ LHSIVEELKN EILKLNLRCS TIISNNVAKE1260
 1261 PVTEKNPPVV EEPSKQEDKP KVEEKVIAEE QAPVEQEEEL EEDEDSTSIS TTTETPSPSG1320
 1321 SYSTKPGLSL GSPRVDEQSG SSNKLDYDDD NNWQRILANR GYDTDYLTKS HERQFAQGQN1380
 1381 LEMPKNCNYD GNGSQEYGPY PEFQADEPST DTEGKAKRAL SVKQQAQLLN AALNDSGSDS1440
 1441 SDGTTTTTTP SPYAMRGKFV RRRSTARRVP IPKIGKASDE VWVRSPRQAK MPQRPKKSMS1500
 1501 KPKKQSSQVT TQATVSSTKL DSLVDVLKDL VRLQIQKEKK SSLLRTQSNN LSKTKPKSIK1560
 1561 PVKVIKRKRL RRRQHKSIAT TIRSPIQTKA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..126] deduced N/A No confident structure predictions are available.
    2 View Details [127..198] FFAS03 0.965 Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP
    3 View Details [199..596] PSI-BLAST 16.154902 Heavy meromyosin subfragment
    4 View Details [597..734] deduced N/A No confident structure predictions are available.
    5 View Details [735..900] deduced N/A No confident structure predictions are available.
    6 View Details [901..990] deduced N/A No confident structure predictions are available.
    7 View Details [991..1079] FFAS03 1.02 CLASS II AMINOACYL TRANSFER RNA SYNTHETASES: CRYSTAL STRUCTURE OF YEAST ASPARTYL-TRNA SYNTHETASE COMPLEXED WITH TRNA ASP
    8 View Details [1080..1359] PSI-BLAST 7.39794 Tropomyosin
    9 View Details [1360..1590] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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