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Protein Overview: btz-PA, FBpp0303117

General Information:
Name(s) found: FBpp0303117 [FlyBase]
btz-PA / FBpp0084590 [FlyBase]
Description(s) found:
Found 29 descriptions.
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  • type=protein; loc=3R:23526370..23528655; ID=FBpp0303117; name=btz-PC; parent=FBgn0045862,FBtr0330084; dbxref=FlyBase:FBpp0303117,FlyBase_Annotation_IDs:CG12878-PC,REFSEQ:NP_001263027,GB_protein:AGB96407; MD5=164436aa19a0c8bed1cc50f2dfa344c2; length=761; release=r5.56; species=Dmel; [FlyBase]
  • The gene barentsz is referred to in FlyBase by the symbol Dmel\btz (CG12878, FBgn0045862). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:23525986..23529174. It has the cytological map location 98B1-98B2. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: pole plasm protein localization; pole plasm oskar mRNA localization; oocyte microtubule cytoskeleton polarization. 8 alleles are reported. The phenotypes of these alleles are annotated with: abdomen; embryonic/first instar larval cuticle; pole cell; denticle belt. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 761 amino acids

    Gene Ontology:
    Cellular Component: nuclear envelope [IDA]
    cytoplasm [IDA]
    Biological Process: pole plasm protein localization [IMP]
    [NOT]bicoid mRNA localization [IMP]
    pole plasm oskar mRNA localization [IMP][TAS]
    [NOT]oocyte microtubule cytoskeleton polarization [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEVEKPTAA TPPTDIPQAT AAPASEAPVA VTPTADTTVD VEPGTSPTQE PNSNSHPHDS  60
   61 EYDTASDLEG GEDYDDEESA SGSASGSGSE EESETDDEDD EVGSETDDGE GEQAMDRSVA 120
  121 DSEAQKKVDE DRSNPQYIPK RGTFYEHDDR TAETEGEILI EPENGAGQAA AEPNGELNGL 180
  181 AAAGATPTGQ TPQISQASKT MRKWQPASGG DRWSHDRFEA TEQAPKSRAE LLQTYGYDIR 240
  241 NEDAPPRARR RRRYTRGPSK YSRNWEDEQA YLKASNKERK PPRPQDFPAL NERKPRGPRT 300
  301 SSSREEKENR RSVAAEGLVP EKQQPLASSS NPHRSQERER ERERERERDR EPKNRNFGRM 360
  361 NGGPGRQNGM EFKKNNRGQQ LRERERGPDQ LDNRNQKPST PRSNQQQQPQ QQPHHQQQPQ 420
  421 QQRQPSQPQQ SPQTPLSTSN LSQRLQQVQQ RNDPSHVGSV QMHSLASQNQ APQQQQQQPL 480
  481 HQEQRNAPKR YSSLRRSQQE ASQHLAEQQQ QQMQQQLHLQ QQQQQQQSQI MIQDPHVLMQ 540
  541 IAYQQQELQA QLQTMQLGPP TAAGAVPTPP KPHAPPAAAY PQAQAAPYYV TGTEPVPVPV 600
  601 PQAPYVNPAS AAYLPTTPAA VAYAQAGPPV VTQPTPPPAQ APPATQPAQP YQNYNTVGGT 660
  661 TYFVPPAQTT SRPSALPQRR PTNAIPILPP SEKHKVKGGA KEEGISDNID HIIDNMFVQR 720
  721 PSAFQATGEG ATPGGGTKEE AAATPPAAEQ NLQPVPATGQ E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..85] deduced N/A No confident structure predictions are available.
    2 View Details [86..315] PSI-BLAST 5.69897 No description for 2j0qI was found.
    3 View Details [316..391] deduced N/A No confident structure predictions are available.
    4 View Details [392..626] PSI-BLAST 5.522879 Sec24
    5 View Details [627..761] FFAS03 1.28 No description for 2j63A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle