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Protein Overview: px-PA

General Information:
Name(s) found: px-PA / FBpp0071749 [FlyBase]
Description(s) found:
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  • gi|24658181|ref|NP_726208.1| plexus, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|21626569|gb|AAF46855.2| plexus, isoform A [Drosophila melanogaster] [NCBI NR]
  • The gene plexus is referred to in FlyBase by the symbol Dmel\px (CG4444, FBgn0003175). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:18384003..18449569. It has the cytological map location 58E4-58E8. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: inter-male aggressive behavior. 55 alleles are reported. The phenotypes of these alleles are annotated with: leg; eye; wing; wing vein. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
  • >CG4444-PA translation from_gene[CG4444 px FBgn0003175] seq_release:3 mol_weight=213865 cds_boundaries:(2R:17,540,356..17,600,333[-]) aa_length:1995 transcript_info:[CG4444-RA seq_release:3] gene_info:[gene symbol:px FBgn0003175 gene_boundaries:(2R:17, [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9W244) CG4444 protein [DrosMelano7227.FASTAC.txt]
  • CG4444-PA [Drosophila melanogaster]gi|24658181|ref|NP_726208.1| CG4444-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:complement(18384308..18386310,18386468..18387241,18422350..18422425,18422500..18422641,18423092..18423310,18423375..18423499,18424095..18424287,18424352..18424627,18424698..18424831,18427942..18428201,18428263..18428482,18442723..1844 [fly-100309-contam.fasta]
  • CG4444-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • plexus CG4444-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:complement(18384308..18386310,18386468..18387241,18422350..18422425,18422500..18422641,18423092..18423310,18423375..18423499,18424095..18424287,18424352..18424627,18424698..18424831,18427942..18428201,18428263..18428482,18442723..18444288); ID=FBpp0071749; name=px-PA; parent=FBgn0003175,FBtr0071838; dbxref=FlyBase:FBpp0071749,FlyBase_Annotation_IDs:CG4444-PA,GB_protein:AAF46855.2,REFSEQ:NP_726208,GB_protein:AAF46855; MD5=98876c7b4b5cf3e52f7f566b5302f912; length=1995; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:complement(18384308..18386310,18386468..18387241,18422350..18422425,18422500..18422641,18423092..18423310,18423375..18423499,18424095..18424287,18424352..18424627,18424698..18424831,18427942..18428201,18428263..18428482,18442723..18444288); ID=FBpp0071749; name=px-PA; parent=FBgn0003175,FBtr0071838; dbxref=FlyBase:FBpp0071749,FlyBase_Annotation_IDs:CG4444-PA,GB_protein:AAF46855.2,REFSEQ:NP_726208,GB_protein:AAF46855; MD5=98876c7b4b5cf3e52f7f566b5302f912; length=1995; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Plexus, isoform A OS=Drosophila melanogaster GN=px PE=2 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:complement(18384308..18386310,18386468..18387241,18422350..18422425,18422500..18422641,18423092..18423310,18423375..18423499,18424095..18424287,18424352..18424627,18424698..18424831,18427942..18428201,18428263..18428482,18442723..18444288); ID=FBpp0071749; name=px-PA; parent=FBgn0003175,FBtr0071838; dbxref=FlyBase:FBpp0071749,FlyBase_Annotation_IDs:CG4444-PA,GB_protein:AAF46855.2,REFSEQ:NP_726208,GB_protein:AAF46855,FlyMine:FBpp0071749,modMine:FBpp0071749; MD5=98876c7b4b5cf3e52f7f566b5302f912; length=1995; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:complement(join(22555218..22556783,22540758..22540977,22540437..22540696,22537193..22537326,22536847..22537122,22536590..22536782,22535870..22535994,22535587..22535805,22534995..22535136,22534845..22534920,22498963..22499736,22496803..22498805)); ID=FBpp0071749; name=px-PA; parent=FBgn0003175,FBtr0071838; dbxref=FlyBase:FBpp0071749,FlyBase_Annotation_IDs:CG4444-PA,GB_protein:AAF46855.2,REFSEQ:NP_726208,GB_protein:AAF46855,FlyMine:FBpp0071749,modMine:FBpp0071749; MD5=98876c7b4b5cf3e52f7f566b5302f912; length=1995; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(22555218..22556783,22540758..22540977,22540437..22540696,22537193..22537326,22536847..22537122,22536590..22536782,22535870..22535994,22535587..22535805,22534995..22535136,22534845..22534920,22498963..22499736,22496803..22498805)); ID=FBpp0071749; name=px-PA; parent=FBgn0003175,FBtr0071838; dbxref=FlyBase:FBpp0071749,FlyBase_Annotation_IDs:CG4444-PA,GB_protein:AAF46855.2,REFSEQ:NP_726208,GB_protein:AAF46855,FlyMine:FBpp0071749,modMine:FBpp0071749; MD5=98876c7b4b5cf3e52f7f566b5302f912; length=1995; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Plexus, isoform A OS=Drosophila melanogaster GN=px PE=4 SV=2 [DROME.fasta.20160308]
  • FBpp0071749 type=protein; loc=2R:complement(join(22555218..22556783,22540758..22540977,22540437..22540696,22537193..22537326,22536847..22537122,22536590..22536782,22535870..22535994,22535587..22535805,22534995..22535136,22534845..22534920,22498963..22499736,22496803..22498805)); ID=FBpp0071749; name=px-PA; parent=FBgn0003175,FBtr0071838; dbxref=FlyBase:FBpp0071749,FlyBase_Annotation_IDs:CG4444-PA,GB_protein:AAF46855.2,REFSEQ:NP_726208,GB_protein:AAF46855,FlyMine:FBpp0071749,modMine:FBpp0071749; MD5=98876c7b4b5cf3e52f7f566b5302f912; length=1995; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:complement(join(22555218..22556783,22540758..22540977,22540437..22540696,22537193..22537326,22536847..22537122,22536590..22536782,22535870..22535994,22535587..22535805,22534995..22535136,22534845..22534920,22498963..22499736,22496803..22498805)); ID=FBpp0071749; name=px-PA; parent=FBgn0003175,FBtr0071838; dbxref=FlyBase:FBpp0071749,FlyBase_Annotation_IDs:CG4444-PA,GB_protein:AAF46855.2,REFSEQ:NP_726208,GB_protein:AAF46855,UniProt/TrEMBL:Q9W244,FlyMine:FBpp0071749,modMine:FBpp0071749; MD5=98876c7b4b5cf3e52f7f566b5302f912; length=1995; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 1995 amino acids

    Gene Ontology:
    Cellular Component: nucleoplasm [NAS]
    Biological Process: imaginal disc-derived wing vein morphogenesis [TAS]
    inter-male aggressive behavior [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKAKAYIKN ELRGGSQQSE PATTPNPTSP ASAPGTPQAT RHSYPPVELM PSPGAAAHRS  60
   61 ARTPGEQYHF GYQAHPAQHY HSGAKSTGRA SAPPDNHHVP MTICFVCGGH GSFEPQPLRI 120
  121 RHNAERPSES YFPFLERHEP PNGVPGVVPG QEYVWACMLC FRSLNEQWDA YERQKKPLLQ 180
  181 RIYHMKRVDG KGYIGADVAT QSEYAAQVLG LSAEHLTQNG LVEGHGDPYA LARHYSPQQP 240
  241 SHHHHSTSRN ASPSPNPIAA VGGGGEFYPR NSTPSSNHNR YLSRPQSRDM PVASPTSRPP 300
  301 SEPPAMKSAG YAQQKFKLSP APPVGYQGQA PYHPAQYQQL QQQTAAYHLL QQQVNAGGGA 360
  361 TESAHYKGNP YGALPSPGSG PLGPRAASTL EDDNATVLDL RNSSNSSAPP APRHVGSTAS 420
  421 SVSQPSQPQS EVGILDLSMP DKNSITEVCY VCGDEQRRGS LIELSTVKPR ETGRPGPSVP 480
  481 YFPLFNEQHP RPARSRPKDP RGMIQACLPC YEDLMQQWNV HQASHKPESE RSYLLRKRST 540
  541 PAAERTTFVC YTCGTDTPSS QLRLVYCCPN AEREPYYPFI KTMKVYKNAS PISPQGMVQV 600
  601 CSTCNEKHSG LAEGGPPPAS SSIHSAVGGG SPSAGHSLES NSAMYSTSGA ITGNSGAQFG 660
  661 GRNSPSEKSL ANSDSMSNVR FRPYETNSNN SNSNTARDLK QIRRSDSRPN SPSSSQGAIE 720
  721 NGHGQYPCSI CKVLCPSNKM DWLSTSAEHM NSHAMHFPCL KANAVTNNNN NNNNTNNNNN 780
  781 NNNNELNSNR VLACKDCKDY LASQWETMDA ERVPLEHRRY NIPSPMLTSS SPNGSRHGAM 840
  841 SINTPPSTPS ISSSTPASTS IYCYLCGLHS DLTLARVLYA SKEGSRPYFP LLLKHNSLPN 900
  901 AEQLRNNSAL VCTFCYHSML NQWRKYEAQS PSVNPADRKY NWHDYNCHLC GITTYRKRVR 960
  961 ALPVNEFPFV KHQKSDDGLL LENGEYAVVC LDCYESLRQQ ASQHDRFGVP ISRRAYNWVP1020
 1021 QPPPPEDSPE SAVARLPCGE RSDRIHINNA LRPVPGKKTT SPKQYDKSKE VPPKAGQKRP1080
 1081 ATSPAPHIPV PHHLQTPPGG GAGGLPGSSV ANSPIPSSAG GNALMNHALP NNHIGTPSPQ1140
 1141 QQHQHQQHQQ QQQQQQHQAQ QQAQQQAVAA AVQQQLAAGV GLPPGAIGAA SASSRGSFAA1200
 1201 ALRTLAKQAD IKEEDVGGDR SVPTSGAGGP PPSSSGPGSL NSVAGRVGSE RPGEDRVSSN1260
 1261 KKRSPPSPQP PEKIARLSHT PQTASLQPEL LARSGFQPYR SDERLMHPAG AFPLEAYSHF1320
 1321 AGLQGIPPAF LNPAGLPYTE QLYLEHRYQL FRAAGAHPSH PHAAALYPQM ASPYSHLYSM1380
 1381 MPGAALGISP AMHDRMKLEE EHRARLAREE EREREIQREK ERELREQREK EQREKEQREK1440
 1441 EQREREQREK EQREKEARER KLRDEERERE RERQQLLTAS HHYSNQLYSP LNRNLLGSMI1500
 1501 PHLNMSLRGP PGALHGLPGM SHYHAAAANA QRQSPHGAMG LNLGMAGLPG VPPLGGHGPN1560
 1561 LQHHLQQAAM GLAHPGAAGL THPGFSAAAL GLGAHPHSLN LSHPHMSPHH PASLAHQLPP1620
 1621 HTSSAGGGGL SNSIPVTASS SLSASSPHTS LNLTSSVKLS ADQVPTSTPS GGVSGSGMPP1680
 1681 TTSSSHIPNM GHYYHHGHLA AMHAAAAAAS GMTPTAAHQQ QPLSLPSSPK ITPPITPSSS1740
 1741 ANGGRAGGSP HAMRHHIAAA VAAAAQQSAM IDKAATPVTH EPTTLDLTGS NSNSSNQAPS1800
 1801 NASSGQPTNH EVNGAESNGA SQTESKEHLA IKEDGHKSSP PPVALEKKPA TPNAAADKPI1860
 1861 HPDSSPENSS RRSASPQSDA NNSLPAVSVT AAASGKCKEE TPKILDSDTT ATTKTDIEEE1920
 1921 KQRARLSVSP TPTAPKIMVA SPDTVSTSGG VTSTTSGTTP PPVVSSSTSS AGKAPALTSD1980
 1981 EVSTSAATSA AEPTR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..220] deduced N/A No confident structure predictions are available.
    2 View Details [221..414] deduced N/A No confident structure predictions are available.
    3 View Details [415..650] deduced N/A No confident structure predictions are available.
    4 View Details [651..782] deduced N/A No confident structure predictions are available.
    5 View Details [783..990] deduced N/A No confident structure predictions are available.
    6 View Details [991..1069] deduced N/A No confident structure predictions are available.
    7 View Details [1070..1317] deduced N/A No confident structure predictions are available.
    8 View Details [1318..1510] deduced N/A No confident structure predictions are available.
    9 View Details [1511..1569] deduced N/A No confident structure predictions are available.
    10 View Details [1570..1783] deduced N/A No confident structure predictions are available.
    11 View Details [1784..1894] deduced N/A No confident structure predictions are available.
    12 View Details [1895..1995] MSA 2.208984 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.58

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle