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Protein Overview: gi|7302641, gi|2...

General Information:
Name(s) found: gi|7302641 [NCBI NR]
gi|24654891 [NCBI NR]
Description(s) found:
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  • gi|7302641|gb|AAF57721.1| scribbler, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|24654891|ref|NP_524678.2| scribbler, isoform A [Drosophila melanogaster] [NCBI NR]
  • >CG5580-PA translation from_gene[CG5580 sbb FBgn0010575] seq_release:3 mol_weight=228109 cds_boundaries:(2R:13,343,840..13,352,314[-]) aa_length:2280 transcript_info:[CG5580-RA seq_release:3] gene_info:[gene symbol:sbb FBgn0010575 gene_boundaries:(2R:1 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9V8E6) CG5580 protein [DrosMelano7227.FASTAC.txt]
  • (AE003800) sbb gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG5580-PA, isoform A [Drosophila melanogaster]gi|24654891|ref|NP_524678.2| CG5580-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:complement(14167608..14167681,14167751..14169018,14169134..14169402,14169470..14169683,14169750..14170749,14170836..14171888,14171955..14172015,14172109..14172226,14172742..14175244,14175632..14175893,14176065..14176085); ID=FBpp00859 [fly-100309-contam.fasta]
  • CG5580-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • scribbler CG5580-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:complement(14167608..14167681,14167751..14169018,14169134..14169402,14169470..14169683,14169750..14170749,14170836..14171888,14171955..14172015,14172109..14172226,14172742..14175244,14175632..14175893,14176065..14176085); ID=FBpp0085944; name=sbb-PA; parent=FBgn0010575,FBtr0086765; dbxref=FlyBase:FBpp0085944,FlyBase_Annotation_IDs:CG5580-PA,GB_protein:AAF57721.1,REFSEQ:NP_524678,GB_protein:AAF57721; MD5=ef59a827e12e96a51cab5c43ed7126cd; length=2280; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
    • Organism: Drosophila melanogaster
    Length: 2280 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA][NAS]
    Biological Process: negative regulation of transcription from RNA polymerase II promoter [NAS]
    regulation of imaginal disc growth [IMP]
    photoreceptor cell development [NAS]
    imaginal disc-derived wing morphogenesis [IMP]
    axon guidance [IMP][NAS]
    larval locomotory behavior [IMP][TAS]
    wing disc dorsal/ventral pattern formation [IGI]
    axon target recognition [IMP]
    negative regulation of gene-specific transcription from RNA polymerase II promoter [IMP]
    Molecular Function: transcription factor activity [NAS]
    zinc ion binding [IEA]
    transcription corepressor activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKKLAKVAL NSSNVATESN IKNNKLLANL SAAGAATATT ATTGTATTTT ATTANQALNF  60
   61 NNKTKATANA TAASANNRHN NNNNSSAIKK HTNTKQLAGK SPACNSSSSS LSSSSSSNSS 120
  121 ESKDTNFEYE DEWNIGGIPE LLDDLDADIE KSAHSSGGGN QATALNAKQA NSSSTSSSSS 180
  181 SKGGASSSSS SAAATGSSSS HKSHKTTLHS NLSATSPTTI KFTRQPVAIG GANSSSSSSA 240
  241 AAAPSGGSAN VVAKGSSSSS SSTSSSSSGK HHHHHHHHSN SSSSGSSSKG YKSALVAQLN 300
  301 SPSPLNSNSK SLSGSGSGSG NTNGAAGAGA GSTLSSSTFA GFSKGGSLVS SSAGAAAALA 360
  361 AGSGQQGSKF SAGGMSSQTG SGSGGNNTSN SNNSSSGSGG SGSGSSTGNT ASGSGNNNST 420
  421 SAGGPPSSQG GNNGNGSGSS SSSSSGKSSA KMSIDHQATL DKGLKMKIKR TKPGTKSSEA 480
  481 KHEIVKATDQ QQNGALGAGS NNSANEDGSS GSSSTNASSL GSTNSSSSAS SGSSSSSGSS 540
  541 SSSSKKHLNN ASSGSGSSSS GGGSQNNASG HASGGGSSGS SQSTPQGTKR GSSGHRREKT 600
  601 KDKNAHSNRM SVDKSAAAAS AAGEKDTPEK CSGTGAGGSP CSCNGDVGAP CSHHACIRRA 660
  661 AHMSNSAGNA NSSAGTGQSG GSSSMSAVPP GVFTPSAGSP STGSPSTVVP AAASLLAATG 720
  721 AASSSASQMA SSSAGGVGGS GGGANAPGPP GKESAGSIKI SSHIAAQLAA AAASNSYSGS 780
  781 GANTNQGQNS NAGGNGGSES KAAAAAQAKL MAPGMISATM HHTISVPAGT GTGDDDTKSP 840
  841 PAKRVKHEAG ASGAGGGKEM VDICIGTSVG TITEPDCLGP CEPGTSVTLE GIVWHETEGG 900
  901 VLVVNVTWRG KTYVGTLLDC TRHDWAPPRF CDSPTEELDS RTPKGRGKRG RSAGLTPDLS 960
  961 NFTETRSSIY FSHAQVHSKL RNGATKGRGG ATPSTSPTAF LPPRPEKRKS KDEAPSPLNG1020
 1021 DASDGASVGG IGGAGGVNMV NASGIPISAS GGGLATQPQS LLNPVTGLNV QISTKKCKTA1080
 1081 SPCAISPVLL ECPEQDCSKK YKHANGLRYH QSHAHGAGGG ASSMDEDSMQ APEDPATPPS1140
 1141 PGVASGTGSG ASVASSAVPA TAPSAGQGTV AVSPNTPLAN SSNPVTNGNV APSAPATGSV1200
 1201 TIAAPNTTPS VVETQAPLTG PPPVTPPAPT PICAVATPGA EQSVSSVLPL GNLPLTAGPN1260
 1261 SATQQQQPPT QQQQPQLLVP GGSAASLQQQ QQQQQPVAGG SITAGISGQA LSQHQQQLMG1320
 1321 GLPAMLSDQQ QQALLQQGAL KAGVLRFGPP DGNPLQQQPG QASVNPQTQQ SPPRPPSHVQ1380
 1381 DQQTPSAYAQ QAGLKTSPGF GSVGVGAASS KQKKNRKSPG PSDFEGRVSR EDVQSPAYSD1440
 1441 ISDDSTPVAE QEMLDKSVGQ AVTAKHIELM GKKPTEVGVG VPPPPAPNMY VPGMYQFYPA1500
 1501 QQQSAPPPQQ QQQQPQYMVQ TEPGKPPGLP PALTQAQQQQ QLQPGAPPPT SQPPSHLLGP1560
 1561 PGQQSVAAHL ADYSGKNKDP PLDLMTKPQP QPGQPPSQQQ QSGQLSGQEN NGKDVGPPTS1620
 1621 QPGSQPPPVN LSAVAGPPPG SLPPGLGGLS ALGAAGLGGP GPGKGMPHFY PFNFIPPAYP1680
 1681 YNVDPNFGSV SIVASEEAAK LSGHPGLPPS SQAQQLSGIS IKEERLKESP SPHDQPKHMP1740
 1741 SQQQMIASKL IKQEPMTKQE IKQEPNSNPG QQHPPPQQQP APQPQQQQPP PPQPQQPHAL1800
 1801 HPKDLQALGA YPAIYQRHSI NLAVQQAREE ELRRYYMFTG RQNSAAAAAA AAAQNAASGG1860
 1861 LPPHPGMMHK DEPGMGSAAQ QQQQQQQQQM QIAQQQQQAI QQHHQHLQQQ HQAQQQQQQQ1920
 1921 QHQQQQQQQQ QQQQQQQQQQ QQQKLKQSQA ASAGANNKAT NLTKDSPKQK GGDDDQPLKV1980
 1981 KQEGQKPTME TQGPPPPPTS QYFLHPSYIS PTPFGFDPNH PMYRNVLMSA AGPYNTAPYH2040
 2041 LPIPRPYHAP EDLSRNTGTK ALDALHHAAS QYYTTHKIHE LSERALKSPT SGSGPVKVSV2100
 2101 SSPSIGPPQP GGPTSSGPGS GPVSGVLGPG SGSNQQPGSA PGSAGGVPLN LQPPPGGMGP2160
 2161 SPGSKPDLSG PKGHGGVTPG SSLDGHKQSM PGGPPPNGPS GNGAVGGVGG AAGNGAAGGG2220
 2221 GAGAADSRSP PPQRHVHTHH HTHVGLGYPM YPAPYGAAVL ASQQAAAVAV INPFPPGPSK2280
 2281

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..102] deduced N/A No confident structure predictions are available.
    2 View Details [103..323] deduced N/A No confident structure predictions are available.
    3 View Details [324..443] deduced N/A No confident structure predictions are available.
    4 View Details [444..598] deduced N/A No confident structure predictions are available.
    5 View Details [599..674] deduced N/A No confident structure predictions are available.
    6 View Details [675..889] deduced N/A No confident structure predictions are available.
    7 View Details [890..1019] deduced N/A No confident structure predictions are available.
    8 View Details [1020..2045] PSI-BLAST 27.0 No description for 1y0fB was found.
    9 View Details [2046..2133] PSI-BLAST 25.045757 No description for 1y0fA was found.
    10 View Details [2134..2280] FFAS03 2.34 Crystal structure of the C-terminal domain of BclA, the major antigen of the exosporium of the Bacillus anthracis spore.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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