YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: Iswi-PA, Iswi-PB...

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

New Feature: Upload Your Own Microscopy Data

No microscopy data found in the PDR for this protein.

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..115] PSI-BLAST 4.09691 Tandem chromodomains of human CHD1 complexed with Histone H3 Tail containing trimethyllysine 4 and dimethylarginine 2
2 View Details [116..668] PSI-BLAST 85.154902 Structure of the SWI2/SNF2 chromatin remodeling domain of eukaryotic Rad54
3 View Details [669..1027] PSI-BLAST 59.522879 nucleosome recognition module of ISWI ATPase

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • chromatin binding
  • 3.84065302930105 bayes_pls_golite062009
  • transcription regulator activity
  • 3.64390820819794 bayes_pls_golite062009
  • binding
  • 3.06758476214113 bayes_pls_golite062009
  • protein binding
  • 2.66728689880621 bayes_pls_golite062009
  • transcription elongation regulator activity
  • 2.46353586381231 bayes_pls_golite062009
  • transcription repressor activity
  • 2.45308491935607 bayes_pls_golite062009
  • nucleic acid binding
  • 2.19167058827256 bayes_pls_golite062009
  • DNA binding
  • 2.05514577638135 bayes_pls_golite062009
  • histone binding
  • 2.00388175060339 bayes_pls_golite062009
  • transcription activator activity
  • 1.46529895769882 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 1.10020047862576 bayes_pls_golite062009
  • methylated histone residue binding
  • 1.03331560428208 bayes_pls_golite062009
  • catalytic activity
  • 0.14067200158938 bayes_pls_golite062009
    2
    Term Confidence Notes
  • general RNA polymerase II transcription factor activity
  • 3.1726526166851 bayes_pls_golite062009
  • binding
  • 2.64537357529343 bayes_pls_golite062009
  • nucleic acid binding
  • 2.51683451033161 bayes_pls_golite062009
  • DNA binding
  • 2.12258000781149 bayes_pls_golite062009
  • transcription regulator activity
  • 2.09345198747025 bayes_pls_golite062009
  • structural constituent of ribosome
  • 1.47858140861683 bayes_pls_golite062009
  • DNA-dependent ATPase activity
  • 1.23094623498843 bayes_pls_golite062009
  • protein binding
  • 1.22129154759482 bayes_pls_golite062009
  • purine ribonucleotide binding
  • 1.21658213854831 bayes_pls_golite062009
  • ribonucleotide binding
  • 1.21652144153182 bayes_pls_golite062009
  • purine nucleotide binding
  • 1.21571071905795 bayes_pls_golite062009
  • nucleotide binding
  • 1.20347573865566 bayes_pls_golite062009
  • motor activity
  • 1.14667913749579 bayes_pls_golite062009
  • transcription elongation regulator activity
  • 1.11383295816593 bayes_pls_golite062009
  • histone acetyltransferase activity
  • 1.05990253628867 bayes_pls_golite062009
  • lysine N-acetyltransferase activity
  • 1.05990253628867 bayes_pls_golite062009
  • catalytic activity
  • 1.00104173493322 bayes_pls_golite062009
  • transcription activator activity
  • 0.889929694023098 bayes_pls_golite062009
  • transcription factor activity
  • 0.887108427603557 bayes_pls_golite062009
  • structural molecule activity
  • 0.86514677273731 bayes_pls_golite062009
  • protein-DNA loading ATPase activity
  • 0.729056749897011 bayes_pls_golite062009
  • steroid hormone receptor binding
  • 0.647625526012423 bayes_pls_golite062009
  • structure-specific DNA binding
  • 0.620212706423176 bayes_pls_golite062009
  • helicase activity
  • 0.6191010101321 bayes_pls_golite062009
  • microtubule motor activity
  • 0.60036517876321 bayes_pls_golite062009
  • DNA helicase activity
  • 0.57378485697982 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.543891899378373 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 0.500462538667228 bayes_pls_golite062009
  • DNA clamp loader activity
  • 0.49811753387851 bayes_pls_golite062009
  • double-stranded DNA binding
  • 0.49000746592281 bayes_pls_golite062009
  • guanyl nucleotide binding
  • 0.388587892299301 bayes_pls_golite062009
  • guanyl ribonucleotide binding
  • 0.372638007722845 bayes_pls_golite062009
  • GTP binding
  • 0.364508542344128 bayes_pls_golite062009
  • hormone receptor binding
  • 0.351501100511918 bayes_pls_golite062009
  • centromeric DNA binding
  • 0.322818640526369 bayes_pls_golite062009
  • ATP-dependent helicase activity
  • 0.29664013896754 bayes_pls_golite062009
  • purine NTP-dependent helicase activity
  • 0.29664013896754 bayes_pls_golite062009
  • translation regulator activity
  • 0.29096092258568 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
  • 0.274994961137851 bayes_pls_golite062009
  • ATP-dependent DNA helicase activity
  • 0.24825301806267 bayes_pls_golite062009
  • nuclear hormone receptor binding
  • 0.246160342138071 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.243902356228423 bayes_pls_golite062009
  • GTPase activity
  • 0.234351968078991 bayes_pls_golite062009
  • ATP binding
  • 0.1860481660648 bayes_pls_golite062009
  • RNA helicase activity
  • 0.18426050934025 bayes_pls_golite062009
  • adenyl ribonucleotide binding
  • 0.152859582615242 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 0.147579541298736 bayes_pls_golite062009
  • RNA-dependent ATPase activity
  • 0.14606996093053 bayes_pls_golite062009
  • adenyl nucleotide binding
  • 0.138615225841109 bayes_pls_golite062009
  • pyrophosphatase activity
  • 0.133017653323467 bayes_pls_golite062009
  • ATP-dependent RNA helicase activity
  • 0.13050483816765 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
  • 0.113504049290503 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
  • 0.111293884322157 bayes_pls_golite062009
  • actin binding
  • 0.00482938540552702 bayes_pls_golite062009
    3 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle