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Protein Overview: sha-PA

General Information:
Name(s) found: sha-PA / FBpp0087221 [FlyBase]
Description(s) found:
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  • gi|24652700|ref|NP_610672.1| shavenoid, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|21627475|gb|AAF58666.2| shavenoid, isoform A [Drosophila melanogaster] [NCBI NR]
  • The gene shavenoid is referred to in FlyBase by the symbol Dmel\sha (CG13209, FBgn0003382). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:7216767..7223482. It has the cytological map location 47F2-47F3. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: non-sensory hair organization; cuticle pattern formation; antennal morphogenesis; epidermal cell differentiation; imaginal disc-derived wing hair organization. 15 alleles are reported. The phenotypes of these alleles are annotated with: trichome; dorsal hair; denticle; dorsal denticle; arista; wing hair; larval cuticle; denticle belt. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • >CG13209-PA translation from_gene[CG13209 CG13209 FBgn0033618] seq_release:3 mol_weight=179314 cds_boundaries:(2R:6,393,991..6,400,703[+]) aa_length:1626 transcript_info:[CG13209-RA seq_release:3] gene_info:[gene symbol:CG13209 FBgn0033618 gene_boundar [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9V5X5) CG13209 protein [DrosMelano7227.FASTAC.txt]
  • CG13209-PA [Drosophila melanogaster]gi|24652700|ref|NP_610672.1| CG13209-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:join(7216767..7217007,7217598..7217696,7217764..7217958,7218618..7218728,7219022..7219348,7219414..7219889,7219944..7220186,7220294..7223482); ID=FBpp0087221; name=sha-PA; parent=FBgn0003382,FBtr0088120; dbxref=FlyBase:FBpp0087221,Fly [fly-100309-contam.fasta]
  • CG13209-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • shavenoid CG13209-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:join(7216767..7217007,7217598..7217696,7217764..7217958,7218618..7218728,7219022..7219348,7219414..7219889,7219944..7220186,7220294..7223482); ID=FBpp0087221; name=sha-PA; parent=FBgn0003382,FBtr0088120; dbxref=FlyBase:FBpp0087221,FlyBase_Annotation_IDs:CG13209-PA,REFSEQ:NP_610672,GB_protein:AAF58666; MD5=6fac788835d847e30b4ba5f1b53d6bb3; length=1626; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:join(7216767..7217007,7217598..7217696,7217764..7217958,7218618..7218728,7219022..7219348,7219414..7219889,7219944..7220186,7220294..7223482); ID=FBpp0087221; name=sha-PA; parent=FBgn0003382,FBtr0088120; dbxref=FlyBase:FBpp0087221,FlyBase_Annotation_IDs:CG13209-PA,GB_protein:AAF58666,REFSEQ:NP_610672; MD5=6fac788835d847e30b4ba5f1b53d6bb3; length=1626; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Shavenoid, isoform A OS=Drosophila melanogaster GN=sha PE=4 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:join(7216767..7217007,7217598..7217696,7217764..7217958,7218618..7218728,7219022..7219348,7219414..7219889,7219944..7220186,7220294..7223482); ID=FBpp0087221; name=sha-PA; parent=FBgn0003382,FBtr0088120; dbxref=FlyBase:FBpp0087221,FlyBase_Annotation_IDs:CG13209-PA,GB_protein:AAF58666,REFSEQ:NP_610672,FlyMine:FBpp0087221,modMine:FBpp0087221; MD5=6fac788835d847e30b4ba5f1b53d6bb3; length=1626; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:join(11329262..11329502,11330093..11330191,11330259..11330453,11331113..11331223,11331517..11331843,11331909..11332384,11332439..11332681,11332789..11335977); ID=FBpp0087221; name=sha-PA; parent=FBgn0003382,FBtr0088120; dbxref=FlyBase:FBpp0087221,FlyBase_Annotation_IDs:CG13209-PA,GB_protein:AAF58666,REFSEQ:NP_610672,FlyMine:FBpp0087221,modMine:FBpp0087221; MD5=6fac788835d847e30b4ba5f1b53d6bb3; length=1626; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:join(11329262..11329502,11330093..11330191,11330259..11330453,11331113..11331223,11331517..11331843,11331909..11332384,11332439..11332681,11332789..11335977); ID=FBpp0087221; name=sha-PA; parent=FBgn0003382,FBtr0088120; dbxref=FlyBase:FBpp0087221,FlyBase_Annotation_IDs:CG13209-PA,GB_protein:AAF58666,REFSEQ:NP_610672,FlyMine:FBpp0087221,modMine:FBpp0087221; MD5=6fac788835d847e30b4ba5f1b53d6bb3; length=1626; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of B7YZF2, Shavenoid, isoform A OS=Drosophila melanogaster GN=sha PE=4 SV=1 [DROME.fasta.20160308]
  • FBpp0087221 type=protein; loc=2R:join(11329262..11329502,11330093..11330191,11330259..11330453,11331113..11331223,11331517..11331843,11331909..11332384,11332439..11332681,11332789..11335977); ID=FBpp0087221; name=sha-PA; parent=FBgn0003382,FBtr0088120; dbxref=FlyBase:FBpp0087221,FlyBase_Annotation_IDs:CG13209-PA,GB_protein:AAF58666,REFSEQ:NP_610672,FlyMine:FBpp0087221,modMine:FBpp0087221; MD5=6fac788835d847e30b4ba5f1b53d6bb3; length=1626; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:join(11329262..11329502,11330093..11330191,11330259..11330453,11331113..11331223,11331517..11331843,11331909..11332384,11332439..11332681,11332789..11335977); ID=FBpp0087221; name=sha-PA; parent=FBgn0003382,FBtr0088120; dbxref=FlyBase:FBpp0087221,FlyBase_Annotation_IDs:CG13209-PA,GB_protein:AAF58666,REFSEQ:NP_610672,UniProt/TrEMBL:A1Z8J5,FlyMine:FBpp0087221,modMine:FBpp0087221; MD5=6fac788835d847e30b4ba5f1b53d6bb3; length=1626; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 1626 amino acids

    Gene Ontology:
    Cellular Component: cell cortex [IDA]
    Biological Process: epidermal cell differentiation [IMP]
    non-sensory hair organization [IMP]
    antennal morphogenesis [IMP]
    imaginal disc-derived wing hair organization [IMP]
    cuticle pattern formation [IMP]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLQSLPLLL LLAVVTLPPA TPTSAARPLT HPRARNHYPS EDLAEEPLMP ASLLLEELQQ  60
   61 TNGQLVNLTR QHDGDTFHTS GLSSACNADT CIGLSSGTAS LVRSTGDGSG QGNDGLNPAT 120
  121 SSLGGGQMEL LTRRLKLQKG RGQVANIDAS GETGCTCRCL PYQRAYREDL GICVDDIHEC 180
  181 SLSPFVSGSS SEKIPFVFLP LKGQIIYPSR EISFASIHTP VCAVTGAQYL GSNGWSDLRN 240
  241 PIDTDYPFRM FRDEGRSFLL WLGEADLRQK MQGRLIVVHL VCRDMTVALN ASNHVKGEPL 300
  301 MPPRNVHSPC VAFRVNGSPV KYAHNVPEVF FQPANSTTLA STSDGMTMRE YVVIGICSLL 360
  361 LGLIYVASVF LYLYMKKRKR HSSRHSLDNL TNDINYPKND QVTYGAPFSR VGSIYSSNSM 420
  421 GLGNGNESNT RTSIGSLKED MGIVKNNPLL QHFPQLSERE HNSGFASDIS NSNSECEMEE 480
  481 KIKTSVLVHP QLSKSPKPSG GTDNAAMDVD DFLQDNECLP AENVAVIDEL MSEEKLENLR 540
  541 AMVSGNVRKK LYFNPAYFEP HLLAEPPQAA IEFLQKIREV IAIAKYKMAS KRYQPSLNII 600
  601 PEEQHPESSS SSPMFNIPLQ QSLAGKGMGD KRNSIEQWLQ SVPNSDATPA PKTLDRPAPP 660
  661 TAKKPSSGSP NKGSLRKEIS APKERPPPPP MQKSKADEGN AKSSSPAPSG PHSSRSTGKS 720
  721 SPEQSPKPKT NVGSTYEGFS AFSVAANVYG FAETGGEIYN NPKFMLADSP AASLRSASSR 780
  781 SKSMKKRSEV LDQFAAANST PTSLTSFDRQ HYNMLRNMKA PEVIYDSLKR EFAAHIPTPD 840
  841 YDSTIEKRIK DIYSSTQSSI PSVPTPDYSS LSRKSLKQFQ PDSPIYRRKS PQYLIVDYET 900
  901 DSLERLEPSK RKSSHSSSSP SSDVSSQLSP SLSTALPLEE EMEISHTVYD RMNGFRKEGE 960
  961 MKKRLAAKHQ HPHPGQQQRQ KEAAARIKYD TPFRGSMTIE VEHEPPSDLE RTDSDQFEPD1020
 1021 TLDRKPKKQS FCDISAWDGH KPIDSDFSQI SSLPDLSRQI SPAPNQGIKP RTASFILRSS1080
 1081 NSFRNLREIY ESPLIAQDNI KYEKKVAQTP EEEGRILTLE AKHSRRQRLM ETSPTHSVMD1140
 1141 ITKVNKTTIT ISSPKPADKA PPTRPKVNQH YCPPLVQSKR PLPPPPPNSS EHQAPDEDAY1200
 1201 SLHSEITGTS EFENSCNNTM SSAISATTEE RTHAKGSRSP KINAKIPEED YEGMYNKKIN1260
 1261 SLRNDYSLTK YLNRRKSQRE EVSKAGPDSP KDVAPEPEFG GSNKSVKEVD VAQFDALSIS1320
 1321 SRSNRSSSHL SERTKEMYRN AGVPVGIAYP QRAASSSGNA SAGGNVQTVY RCEIEQAQLT1380
 1381 AGMQIAIGLK DRAKKAKDLK NAWRKFVTMA ANKFSPSQSP APTYGSKTAA GFLEDDGIAS1440
 1441 IIEDAAQSAG MGQPGSQTYY EQRFGQLDSG YMSTDSTELY KRNVYDRYNF KMPCGRGQII1500
 1501 RVDTIEDNEE ESGPNDNRFE DLEHMVSPSH SRRSPENNAV VACDLSDAES DKTLTRSHSQ1560
 1561 TNSQERNVRG STTTMSSYSS DENGRGRSTC CGSSETDEET NAEDMWESGA ESIETHSVLY1620
 1621 KMIRKS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..116] deduced N/A No confident structure predictions are available.
    2 View Details [117..308] deduced N/A No confident structure predictions are available.
    3 View Details [309..409] deduced N/A No confident structure predictions are available.
    4 View Details [410..590] MSA 1.229993 View MSA. No confident structure predictions are available.
    5 View Details [591..715] MSA 3.249996 View MSA. No confident structure predictions are available.
    6 View Details [716..795] deduced N/A No confident structure predictions are available.
    7 View Details [796..1029] deduced N/A No confident structure predictions are available.
    8 View Details [1030..1099] deduced N/A No confident structure predictions are available.
    9 View Details [1100..1212] deduced N/A No confident structure predictions are available.
    10 View Details [1213..1380] deduced N/A No confident structure predictions are available.
    11 View Details [1381..1469] deduced N/A No confident structure predictions are available.
    12 View Details [1470..1626] MSA 1.178997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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