Description(s) found:
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gi|24582300|ref|NP_723205.1| thrombospondin, isoform E [Drosophila melanogaster]
[NCBI NR]
gi|24582298|ref|NP_723204.1| thrombospondin, isoform D [Drosophila melanogaster]
[NCBI NR]
gi|24582296|ref|NP_723203.1| thrombospondin, isoform C [Drosophila melanogaster]
[NCBI NR]
gi|22945794|gb|AAN10594.1| thrombospondin, isoform E [Drosophila melanogaster]
[NCBI NR]
gi|22945793|gb|AAN10593.1| thrombospondin, isoform D [Drosophila melanogaster]
[NCBI NR]
gi|22945792|gb|AAN10592.1| thrombospondin, isoform C [Drosophila melanogaster]
[NCBI NR]
gi|17861794|gb|AAL39374.1| GH27479p [Drosophila melanogaster]
[NCBI NR]
The gene Thrombospondin is referred to in FlyBase by the symbol Dmel\Tsp (CG11326, FBgn0031850). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:6686786..6709085. It has the cytological map location 26F7-27A1. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: calcium ion binding. There is experimental evidence that it is involved in the biological process</span>: muscle organ development; cell adhesion mediated by integrin; muscle attachment. 14 alleles are reported. The phenotypes of these alleles are annotated with: tendon cell; dorsal oblique muscle; lateral longitudinal muscle; dorsal acute muscle; embryonic/larval muscle system; ventral longitudinal muscle. It has 6 annotated transcripts and 6 annotated polypeptides.
[FlyBase]
>CG11326-PE translation from_gene[CG11326 Tsp FBgn0031850] seq_release:3 mol_weight=47355 cds_boundaries:(2L:6,682,270..6,694,050[-]) aa_length:419 transcript_info:[CG11326-RE seq_release:3] gene_info:[gene symbol:Tsp FBgn0031850 gene_boundaries:(2L:6,
[hmr_yeast5_DM3-1_pombe.fasta]
>CG11326-PC translation from_gene[CG11326 Tsp FBgn0031850] seq_release:3 mol_weight=47355 cds_boundaries:(2L:6,682,270..6,694,050[-]) aa_length:419 transcript_info:[CG11326-RC seq_release:3] gene_info:[gene symbol:Tsp FBgn0031850 gene_boundaries:(2L:6,
[hmr_yeast5_DM3-1_pombe.fasta]
>CG11326-PD translation from_gene[CG11326 Tsp FBgn0031850] seq_release:3 mol_weight=47355 cds_boundaries:(2L:6,682,270..6,694,050[-]) aa_length:419 transcript_info:[CG11326-RD seq_release:3] gene_info:[gene symbol:Tsp FBgn0031850 gene_boundaries:(2L:6,
[hmr_yeast5_DM3-1_pombe.fasta]
(Q8T0I9) GH27479p (CG11326-PC)
[DrosMelano7227.FASTAC.txt]
CG11326-PE, isoform E [Drosophila melanogaster]gi|22945793|gb|AAN10593.1| CG11326-PD, isoform D [Drosophila melanogaster]gi|22945792|gb|AAN10592.1| CG11326-PC, isoform C [Drosophila melanogaster]gi|17861794|gb|AAL39374.1| GH27479p [Drosophila melanogas
[nrdb_11152004_Chlamydomonas]
type=protein; loc=2L:complement(6690051..6690139,6690977..6691098,6697010..6697127,6697263..6697457,6699765..6699902,6699987..6700116,6700181..6700496,6700553..6700619,6701750..6701834); ID=FBpp0078940; name=Tsp-PD; parent=FBgn0031850,FBtr0079311; dbxref=
[fly-100309-contam.fasta]
type=protein; loc=2L:complement(6690051..6690139,6690977..6691098,6697010..6697127,6697263..6697457,6699765..6699902,6699987..6700116,6700181..6700496,6700553..6700619,6701750..6701834); ID=FBpp0078942; name=Tsp-PC; parent=FBgn0031850,FBtr0079313; dbxref=
[fly-100309-contam.fasta]
type=protein; loc=2L:complement(6690051..6690139,6690977..6691098,6697010..6697127,6697263..6697457,6699765..6699902,6699987..6700116,6700181..6700496,6700553..6700619,6701750..6701834); ID=FBpp0078943; name=Tsp-PE; parent=FBgn0031850,FBtr0079314; dbxref=
[fly-100309-contam.fasta]
CG11326-PE, isoform E [Drosophila melanogaster]
[nr-271106-contam.fasta]
Thrombospondin CG11326-PC, isoform C [Drosophila melanogaster]
[nr-271106-contam.fasta]
Thrombospondin CG11326-PE, isoform E [Drosophila melanogaster]
[nr-271106-contam.fasta]
GH27479p [Drosophila melanogaster]
[nr-271106-contam.fasta]
CG11326-PC, isoform C [Drosophila melanogaster]
[nr-271106-contam.fasta]
CG11326-PD, isoform D [Drosophila melanogaster]
[nr-271106-contam.fasta]
Thrombospondin CG11326-PD, isoform D [Drosophila melanogaster]
[nr-271106-contam.fasta]
type=protein; loc=2L:complement(6690051..6690139,6690977..6691098,6697010..6697127,6697263..6697457,6699765..6699902,6699987..6700116,6700181..6700496,6700553..6700619,6701750..6701834); ID=FBpp0078940; name=Tsp-PD; parent=FBgn0031850,FBtr0079311; dbxref=FlyBase:FBpp0078940,FlyBase_Annotation_IDs:CG11326-PD,GB_protein:AAN10593.1,REFSEQ:NP_723204,GB_protein:AAN10593; MD5=9db2bb808b0abfd16963064630133298; length=419; release=r5.16; species=Dmel;
[fly-contam-His-TEV-Tub4complex.fasta]
type=protein; loc=2L:complement(6690051..6690139,6690977..6691098,6697010..6697127,6697263..6697457,6699765..6699902,6699987..6700116,6700181..6700496,6700553..6700619,6701750..6701834); ID=FBpp0078942; name=Tsp-PC; parent=FBgn0031850,FBtr0079313; dbxref=FlyBase:FBpp0078942,FlyBase_Annotation_IDs:CG11326-PC,GB_protein:AAN10592.1,REFSEQ:NP_723203,GB_protein:AAN10592; MD5=9db2bb808b0abfd16963064630133298; length=419; release=r5.16; species=Dmel;
[fly-contam-His-TEV-Tub4complex.fasta]
type=protein; loc=2L:complement(6690051..6690139,6690977..6691098,6697010..6697127,6697263..6697457,6699765..6699902,6699987..6700116,6700181..6700496,6700553..6700619,6701750..6701834); ID=FBpp0078943; name=Tsp-PE; parent=FBgn0031850,FBtr0079314; dbxref=FlyBase:FBpp0078943,FlyBase_Annotation_IDs:CG11326-PE,GB_protein:AAN10594.1,REFSEQ:NP_723205,GB_protein:AAN10594; MD5=9db2bb808b0abfd16963064630133298; length=419; release=r5.16; species=Dmel;
[fly-contam-His-TEV-Tub4complex.fasta]
type=protein; loc=2L:complement(6690051..6690139,6690977..6691098,6697010..6697127,6697263..6697457,6699765..6699902,6699987..6700116,6700181..6700496,6700553..6700619,6701750..6701834); ID=FBpp0078940; name=Tsp-PD; parent=FBgn0031850,FBtr0079311; dbxref=FlyBase:FBpp0078940,FlyBase_Annotation_IDs:CG11326-PD,GB_protein:AAN10593.1,REFSEQ:NP_723204,GB_protein:AAN10593; MD5=9db2bb808b0abfd16963064630133298; length=419; release=r5.21; species=Dmel;
[Other_drosophila_na_09-09-2009_reversed.fasta]
type=protein; loc=2L:complement(6690051..6690139,6690977..6691098,6697010..6697127,6697263..6697457,6699765..6699902,6699987..6700116,6700181..6700496,6700553..6700619,6701750..6701834); ID=FBpp0078942; name=Tsp-PC; parent=FBgn0031850,FBtr0079313; dbxref=FlyBase:FBpp0078942,FlyBase_Annotation_IDs:CG11326-PC,GB_protein:AAN10592.1,REFSEQ:NP_723203,GB_protein:AAN10592; MD5=9db2bb808b0abfd16963064630133298; length=419; release=r5.21; species=Dmel;
[Other_drosophila_na_09-09-2009_reversed.fasta]
type=protein; loc=2L:complement(6690051..6690139,6690977..6691098,6697010..6697127,6697263..6697457,6699765..6699902,6699987..6700116,6700181..6700496,6700553..6700619,6701750..6701834); ID=FBpp0078943; name=Tsp-PE; parent=FBgn0031850,FBtr0079314; dbxref=FlyBase:FBpp0078943,FlyBase_Annotation_IDs:CG11326-PE,GB_protein:AAN10594.1,REFSEQ:NP_723205,GB_protein:AAN10594; MD5=9db2bb808b0abfd16963064630133298; length=419; release=r5.21; species=Dmel;
[Other_drosophila_na_09-09-2009_reversed.fasta]
GH27479p OS=Drosophila melanogaster GN=Tsp PE=1 SV=1
[UniProt_drosophila_07-01-2011_reversed.fasta]
type=protein; loc=2L:complement(6690051..6690139,6690977..6691098,6697010..6697127,6697263..6697457,6699765..6699902,6699987..6700116,6700181..6700496,6700553..6700619,6701750..6701834); ID=FBpp0078940; name=Tsp-PD; parent=FBgn0031850,FBtr0079311; dbxref=FlyBase:FBpp0078940,FlyBase_Annotation_IDs:CG11326-PD,GB_protein:AAN10593.1,REFSEQ:NP_723204,GB_protein:AAN10593; MD5=9db2bb808b0abfd16963064630133298; length=419; release=r5.46; species=Dmel;
[fly-062812-sfps-sandra-contam.fasta]
type=protein; loc=2L:complement(6690051..6690139,6690977..6691098,6697010..6697127,6697263..6697457,6699765..6699902,6699987..6700116,6700181..6700496,6700553..6700619,6701750..6701834); ID=FBpp0078942; name=Tsp-PC; parent=FBgn0031850,FBtr0079313; dbxref=FlyBase:FBpp0078942,FlyBase_Annotation_IDs:CG11326-PC,GB_protein:AAN10592.1,REFSEQ:NP_723203,GB_protein:AAN10592,FlyMine:FBpp0078942,modMine:FBpp0078942; MD5=9db2bb808b0abfd16963064630133298; length=419; release=r5.46; species=Dmel;
[fly-062812-sfps-sandra-contam.fasta]
type=protein; loc=2L:complement(6690051..6690139,6690977..6691098,6697010..6697127,6697263..6697457,6699765..6699902,6699987..6700116,6700181..6700496,6700553..6700619,6701750..6701834); ID=FBpp0078943; name=Tsp-PE; parent=FBgn0031850,FBtr0079314; dbxref=FlyBase:FBpp0078943,FlyBase_Annotation_IDs:CG11326-PE,GB_protein:AAN10594.1,REFSEQ:NP_723205,GB_protein:AAN10594; MD5=9db2bb808b0abfd16963064630133298; length=419; release=r5.46; species=Dmel;
[fly-062812-sfps-sandra-contam.fasta]
GH27479p OS=Drosophila melanogaster GN=Tsp PE=2 SV=1
[UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
type=protein; loc=2L:complement(join(6701750..6701834,6700553..6700619,6700181..6700496,6699987..6700116,6699765..6699902,6697263..6697457,6697010..6697127,6690977..6691098,6690051..6690139)); ID=FBpp0078940; name=Tsp-PD; parent=FBgn0031850,FBtr0079311; dbxref=FlyBase:FBpp0078940,FlyBase_Annotation_IDs:CG11326-PD,GB_protein:AAN10593.1,REFSEQ:NP_723204,GB_protein:AAN10593; MD5=9db2bb808b0abfd16963064630133298; length=419; release=r6.02; species=Dmel;
[fly-2014-05-contam.fasta]
type=protein; loc=2L:complement(join(6701750..6701834,6700553..6700619,6700181..6700496,6699987..6700116,6699765..6699902,6697263..6697457,6697010..6697127,6690977..6691098,6690051..6690139)); ID=FBpp0078942; name=Tsp-PC; parent=FBgn0031850,FBtr0079313; dbxref=FlyBase:FBpp0078942,FlyBase_Annotation_IDs:CG11326-PC,GB_protein:AAN10592.1,REFSEQ:NP_723203,GB_protein:AAN10592,FlyMine:FBpp0078942,modMine:FBpp0078942; MD5=9db2bb808b0abfd16963064630133298; length=419; release=r6.02; species=Dmel;
[fly-2014-05-contam.fasta]
type=protein; loc=2L:complement(join(6701750..6701834,6700553..6700619,6700181..6700496,6699987..6700116,6699765..6699902,6697263..6697457,6697010..6697127,6690977..6691098,6690051..6690139)); ID=FBpp0078943; name=Tsp-PE; parent=FBgn0031850,FBtr0079314; dbxref=FlyBase:FBpp0078943,FlyBase_Annotation_IDs:CG11326-PE,GB_protein:AAN10594.1,REFSEQ:NP_723205,GB_protein:AAN10594; MD5=9db2bb808b0abfd16963064630133298; length=419; release=r6.02; species=Dmel;
[fly-2014-05-contam.fasta]
type=protein; loc=2L:complement(join(6701750..6701834,6700553..6700619,6700181..6700496,6699987..6700116,6699765..6699902,6697263..6697457,6697010..6697127,6690977..6691098,6690051..6690139)); ID=FBpp0078940; name=Tsp-PD; parent=FBgn0031850,FBtr0079311; dbxref=FlyBase:FBpp0078940,FlyBase_Annotation_IDs:CG11326-PD,GB_protein:AAN10593.1,REFSEQ:NP_723204,GB_protein:AAN10593; MD5=9db2bb808b0abfd16963064630133298; length=419; release=r6.07; species=Dmel;
[fly-08202015-contam.fasta]
type=protein; loc=2L:complement(join(6701750..6701834,6700553..6700619,6700181..6700496,6699987..6700116,6699765..6699902,6697263..6697457,6697010..6697127,6690977..6691098,6690051..6690139)); ID=FBpp0078943; name=Tsp-PE; parent=FBgn0031850,FBtr0079314; dbxref=FlyBase:FBpp0078943,FlyBase_Annotation_IDs:CG11326-PE,GB_protein:AAN10594.1,REFSEQ:NP_723205,GB_protein:AAN10594; MD5=9db2bb808b0abfd16963064630133298; length=419; release=r6.07; species=Dmel;
[fly-08202015-contam.fasta]
type=protein; loc=2L:complement(join(6701750..6701834,6700553..6700619,6700181..6700496,6699987..6700116,6699765..6699902,6697263..6697457,6697010..6697127,6690977..6691098,6690051..6690139)); ID=FBpp0078942; name=Tsp-PC; parent=FBgn0031850,FBtr0079313; dbxref=FlyBase:FBpp0078942,FlyBase_Annotation_IDs:CG11326-PC,GB_protein:AAN10592.1,REFSEQ:NP_723203,GB_protein:AAN10592,FlyMine:FBpp0078942,modMine:FBpp0078942; MD5=9db2bb808b0abfd16963064630133298; length=419; release=r6.07; species=Dmel;
[fly-08202015-contam.fasta]
Isoform of Q9VM97, GH27479p OS=Drosophila melanogaster GN=Tsp PE=1 SV=1
[DROME.fasta.20160308]
FBpp0078940 type=protein; loc=2L:complement(join(6701750..6701834,6700553..6700619,6700181..6700496,6699987..6700116,6699765..6699902,6697263..6697457,6697010..6697127,6690977..6691098,6690051..6690139)); ID=FBpp0078940; name=Tsp-PD; parent=FBgn0031850,FBtr0079311; dbxref=FlyBase:FBpp0078940,FlyBase_Annotation_IDs:CG11326-PD,GB_protein:AAN10593.1,REFSEQ:NP_723204,GB_protein:AAN10593; MD5=9db2bb808b0abfd16963064630133298; length=419; release=r6.09; species=Dmel;
[dmel-all-translation-r6.09.fasta]
FBpp0078942 type=protein; loc=2L:complement(join(6701750..6701834,6700553..6700619,6700181..6700496,6699987..6700116,6699765..6699902,6697263..6697457,6697010..6697127,6690977..6691098,6690051..6690139)); ID=FBpp0078942; name=Tsp-PC; parent=FBgn0031850,FBtr0079313; dbxref=FlyBase:FBpp0078942,FlyBase_Annotation_IDs:CG11326-PC,GB_protein:AAN10592.1,REFSEQ:NP_723203,GB_protein:AAN10592,FlyMine:FBpp0078942,modMine:FBpp0078942; MD5=9db2bb808b0abfd16963064630133298; length=419; release=r6.09; species=Dmel;
[dmel-all-translation-r6.09.fasta]
FBpp0078943 type=protein; loc=2L:complement(join(6701750..6701834,6700553..6700619,6700181..6700496,6699987..6700116,6699765..6699902,6697263..6697457,6697010..6697127,6690977..6691098,6690051..6690139)); ID=FBpp0078943; name=Tsp-PE; parent=FBgn0031850,FBtr0079314; dbxref=FlyBase:FBpp0078943,FlyBase_Annotation_IDs:CG11326-PE,GB_protein:AAN10594.1,REFSEQ:NP_723205,GB_protein:AAN10594; MD5=9db2bb808b0abfd16963064630133298; length=419; release=r6.09; species=Dmel;
[dmel-all-translation-r6.09.fasta]
[fly-122215-dmel-6-09-contam.fasta]
type=protein; loc=2L:complement(join(6701750..6701834,6700553..6700619,6700181..6700496,6699987..6700116,6699765..6699902,6697263..6697457,6697010..6697127,6690977..6691098,6690051..6690139)); ID=FBpp0078940; name=Tsp-PD; parent=FBgn0031850,FBtr0079311; dbxref=FlyBase:FBpp0078940,FlyBase_Annotation_IDs:CG11326-PD,GB_protein:AAN10593.1,REFSEQ:NP_723204,GB_protein:AAN10593,UniProt/TrEMBL:Q8T0I9; MD5=9db2bb808b0abfd16963064630133298; length=419; release=r6.14; species=Dmel;
[fly-dmel-jan2017-sandracontam.fasta]
type=protein; loc=2L:complement(join(6701750..6701834,6700553..6700619,6700181..6700496,6699987..6700116,6699765..6699902,6697263..6697457,6697010..6697127,6690977..6691098,6690051..6690139)); ID=FBpp0078942; name=Tsp-PC; parent=FBgn0031850,FBtr0079313; dbxref=FlyBase:FBpp0078942,FlyBase_Annotation_IDs:CG11326-PC,GB_protein:AAN10592.1,REFSEQ:NP_723203,GB_protein:AAN10592,UniProt/TrEMBL:Q8T0I9,FlyMine:FBpp0078942,modMine:FBpp0078942; MD5=9db2bb808b0abfd16963064630133298; length=419; release=r6.14; species=Dmel;
[fly-dmel-jan2017-sandracontam.fasta]
type=protein; loc=2L:complement(join(6701750..6701834,6700553..6700619,6700181..6700496,6699987..6700116,6699765..6699902,6697263..6697457,6697010..6697127,6690977..6691098,6690051..6690139)); ID=FBpp0078943; name=Tsp-PE; parent=FBgn0031850,FBtr0079314; dbxref=FlyBase:FBpp0078943,FlyBase_Annotation_IDs:CG11326-PE,GB_protein:AAN10594.1,REFSEQ:NP_723205,GB_protein:AAN10594,UniProt/TrEMBL:Q8T0I9; MD5=9db2bb808b0abfd16963064630133298; length=419; release=r6.14; species=Dmel;
[fly-dmel-jan2017-sandracontam.fasta]
|