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Protein Overview: CDH1

General Information:
Name(s) found: CDH1 [HGNC (HUGO)]
Description(s) found:
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  • gi|67515435|gb|AAY68225.1| cadherin 1, type 1, E-cadherin (epithelial) [Homo sapiens] [NCBI NR]
  • gi|4757960|ref|NP_004351.1| cadherin 1, type 1 preproprotein [Homo sapiens] [NCBI NR]
  • gi|399166|sp|P12830.3|CADH1_HUMAN RecName: Full=Cadherin-1; AltName: Full=Epithelial cadherin; Short=E-cadherin; AltName: Full=Uvomorulin; AltName: Full=CAM 120/80; AltName: CD_antigen=CD324; Contains: RecName: Full=E-Cad/CTF1; Contains: RecName: Full=E-C [NCBI NR]
  • pir||IJHUCE cadherin 1 precursor [validated] - human [NCBI NR]
  • gi|31073|emb|CAA78353.1| E-cadherin [Homo sapiens] [NCBI NR]
  • gi|189069110|dbj|BAG35448.1| unnamed protein product [Homo sapiens] [NCBI NR]
  • gi|158261047|dbj|BAF82701.1| unnamed protein product [Homo sapiens] [NCBI NR]
  • gi|119603649|gb|EAW83243.1| cadherin 1, type 1, E-cadherin (epithelial), isoform CRA_b [Homo sapiens] [NCBI NR]
  • cadherin 1, type 1, E-cadherin (epithelial) [HGNC (HUGO)]
  • Cadherin-1 OS=Homo sapiens GN=CDH1 PE=1 SV=3 [Swiss-Prot]
  • (P12830) Epithelial-cadherin precursor (E-cadherin) (Uvomorulin) (Cadherin-1) (CAM 120/80) [Swiss-Prot]
  • Epithelial-cadherin precursor [hmr_yeast5_DM3-1_pombe.fasta]
  • cadherin 1, type 1 preproprotein; cadherin 1, E-cadherin (epithelial); uvomorulin; calcium-dependent adhesion protein, epithelial; cell-CAM 120/80; Arc-1 [HMR_022704.fasta]
  • cadherin 1, type 1 preproprotein; calcium-dependent adhesion protein, epithelial; cadherin 1, E-cadherin (epithelial); cell-CAM 120/80; Arc-1; uvomorulin [Human2242005.fasta]
  • cadherin 1, type 1 preproprotein [Homo sapiens]gi|319931|pir||IJHUCE cadherin 1 precursor [validated] - humangi|31073|emb|CAA78353.1| E-cadherin [Homo sapiens]gi|399166|sp|P12830|CAD1_HUMAN Epithelial-cadherin precursor (E-cadherin) (Uvomorulin) (Cadhe [nrdb_11152004_Chlamydomonas]
  • Epithelial-cadherin precursor (E-cadherin) (Uvomorulin) (Cadherin-1) (CAM 120/80) [Yateslab_human_na_07-28-2006_reversed.fasta]
  • Tax_Id=9606 Epithelial-cadherin precursor [EBI-IPI_human_3.17_05-09-2006_con_reversed.fasta]
  • (NM_004360) cadherin 1, type 1 preproprotein; calcium-dependent adhesion protein, epithelial; cadherin 1, E-cadherin (epithelial); uvomorulin; cell-CAM 120/80; Arc-1 [Homo sapiens] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • cadherin 1, type 1 preproprotein [Homo sapiens] [NCBI-RefSeq_Human_na_12_06_2006_con_reversed.fasta]
  • cadherin 1, type 1 preproprotein; calcium-dependent adhesion protein, epithelial; cadherin 1, E-cadherin (epithelial); cell-CAM 120/80; Arc-1; uvomorulin [Homo sapiens] [HumanGallus06162005.fasta]
  • cadherin 1, type 1 preproprotein; cadherin 1, E-cadherin (epithelial); uvomorulin; calcium-dependent adhesion protein, epithelial; cell-CAM 120/80; Arc-1 [Homo sapiens] [human-NCBI-042104-rand.fasta]
  • Epithelial cadherin precursor (E-cadherin) (Cadherin-1) (Uvomorulin) (CAM 120/80) (CD324 antigen) [Contains: E-Cad/CTF1; E-Cad/CTF2; E-Cad/CTF3] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • unnamed protein product [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • cadherin 1, type 1, E-cadherin (epithelial), isoform CRA_b [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • cadherin 1, type 1, E-cadherin (epithelial) [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • E-cadherin [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • Tax_Id=9606 Gene_Symbol=CDH1 Epithelial cadherin [human-ipi-250309-contam.fasta]
  • Epithelial-cadherin precursor (E-cadherin) (Uvomorulin) (Cadherin-1) (CAM 120/80) (CD324 antigen) [Contains: E-Cad/CTF1; E-Cad/CTF2; E-Cad/CTF3] [nr-271106-contam.fasta]
  • IPI:IPI00025861.3|SWISS-PROT:P12830|TREMBL:A5D8W4;A8K1U7;B3GN61|ENSEMBL:ENSP00000261769|REFSEQ:NP_004351|H-INV:HIT000326429|VEGA:OTTHUMP00000080262;OTTHUMP00000174868 Tax_Id=9606 Gene_Symbol=CDH1 Cadherin-1 [ipi.HUMAN.fasta.20090807]
  • [human_BMb_040710_contam.fasta]
  • Tax_Id=9606 Gene_Symbol=CDH1 Epithelial-cadherin precursor [EBI-IPI_human_3.30_06-28-2007_con_reversed.fasta]
  • Tax_Id=9606 Gene_Symbol=CDH1 Cadherin-1 [EBI-IPI_Human_3.71_03-24-2010_reversed.fasta]
  • P12830;Q13799;Q14216;Q15855;Q16194;Q4PJ14; RecName: Full=Cadherin-1; AltName: Full=Epithelial cadherin; AltName: Full=Uvomorulin; AltName: Full=CAM 120/80; AltName: CD_antigen=CD324; Contains: RecName: Full=E-Cad/CTF1; Contains: RecName: Full=E-Cad/CTF2; Contains: RecName: Full=E-Cad/CTF3; Flags: Precursor; [UniProt_Human_2010_06_06-01-2010_reversed.fasta]
  • Cadherin-1 OS=Homo sapiens GN=CDH1 [011711_HMR.fasta]
  • GeneSymbol=CDH1 Synonyms=Arc-1|CD324|CDHE|ECAD|LCAM|UVO cadherin-1 preproprotein [Homo sapiens] [NCBI-RefSeq_Human_Seno_07-12-2011_reversed.fasta]
  • IPI:IPI00025861.3|SWISS-PROT:P12830|TREMBL:A8K1U7;B3GN61|ENSEMBL:ENSP00000261769|REFSEQ:NP_004351|H-INV:HIT000326429|VEGA:OTTHUMP00000174868 Tax_Id=9606 Gene_Symbol=CDH1 Cadherin-1 [ipi.HUMAN.20110912.fasta]
  • Cadherin-1 GN=CDH1 [Doctor+uniprot-HUMAN-120911.fasta]
    • Organism: Homo sapiens
    Length: 882 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGPWSRSLSA LLLLLQVSSW LCQEPEPCHP GFDAESYTFT VPRRHLERGR VLGRVNFEDC  60
   61 TGRQRTAYFS LDTRFKVGTD GVITVKRPLR FHNPQIHFLV YAWDSTYRKF STKVTLNTVG 120
  121 HHHRPPPHQA SVSGIQAELL TFPNSSPGLR RQKRDWVIPP ISCPENEKGP FPKNLVQIKS 180
  181 NKDKEGKVFY SITGQGADTP PVGVFIIERE TGWLKVTEPL DRERIATYTL FSHAVSSNGN 240
  241 AVEDPMEILI TVTDQNDNKP EFTQEVFKGS VMEGALPGTS VMEVTATDAD DDVNTYNAAI 300
  301 AYTILSQDPE LPDKNMFTIN RNTGVISVVT TGLDRESFPT YTLVVQAADL QGEGLSTTAT 360
  361 AVITVTDTND NPPIFNPTTY KGQVPENEAN VVITTLKVTD ADAPNTPAWE AVYTILNDDG 420
  421 GQFVVTTNPV NNDGILKTAK GLDFEAKQQY ILHVAVTNVV PFEVSLTTST ATVTVDVLDV 480
  481 NEAPIFVPPE KRVEVSEDFG VGQEITSYTA QEPDTFMEQK ITYRIWRDTA NWLEINPDTG 540
  541 AISTRAELDR EDFEHVKNST YTALIIATDN GSPVATGTGT LLLILSDVND NAPIPEPRTI 600
  601 FFCERNPKPQ VINIIDADLP PNTSPFTAEL THGASANWTI QYNDPTQESI ILKPKMALEV 660
  661 GDYKINLKLM DNQNKDQVTT LEVSVCDCEG AAGVCRKAQP VEAGLQIPAI LGILGGILAL 720
  721 LILILLLLLF LRRRAVVKEP LLPPEDDTRD NVYYYDEEGG GEEDQDFDLS QLHRGLDARP 780
  781 EVTRNDVAPT LMSVPRYLPR PANPDEIGNF IDENLKAADT DPTAPPYDSL LVFDYEGSGS 840
  841 EAASLSSLNS SESDKDQDYD YLNEWGNRFK KLADMYGGGE DD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MIS12 No Comments Cheeseman, I.M., et al. (2004)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..882] PSI-BLAST 174.0 W-shaped trans interactions of cadherins model based on fitting C-cadherin (1L3W) to 3D map of desmosomes obtained by electron tomography


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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