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Protein Overview: ATG11

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run MLP2 #34 Asynchronous SPB prep Keck JM, et al. (2011)
View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data ATG11 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..376] PSI-BLAST 24.0 Heavy meromyosin subfragment
2 View Details [377..482] deduced N/A Confident ab initio structure predictions are available.
3 View Details [483..553] PSI-BLAST 8.30103 Tropomyosin
4 View Details [554..636] PSI-BLAST 8.30103 Tropomyosin
5 View Details [637..698] PSI-BLAST 8.30103 Tropomyosin
6 View Details [699..768] PSI-BLAST 8.30103 Tropomyosin
7 View Details [769..925] PSI-BLAST 4.0 Ribonuclease domain of colicin E3; Colicin E3 translocation domain; Colicin E3 receptor domain
8 View Details [926..1178] MSA 27.829997 View MSA. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • binding
  • 2.24002842608348 bayes_pls_golite062009
  • nucleic acid binding
  • 1.29023721388505 bayes_pls_golite062009
  • transcription regulator activity
  • 1.23558162468883 bayes_pls_golite062009
  • DNA binding
  • 1.22770101477594 bayes_pls_golite062009
  • protein binding
  • 1.03780839342631 bayes_pls_golite062009
  • transcription factor activity
  • 0.65548647141585 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.16394692014973 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.
    7 No functions predicted.
    8 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle