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Protein Overview: MRN1

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run RPA135 No Comments Schneider, DA, et al. (2006)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

  BAIT PREY HITS PUBLICATION
View Screen YPI1 MRN1 2 Hazbun TR, et al. (2003)

Microscopy / Localization Data

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..167] MSA 5.350997 View MSA. No confident structure predictions are available.
2 View Details [168..293] PSI-BLAST 55.09691 Poly(A)-binding protein
3 View Details [294..402] PSI-BLAST 11.522879 Polypyrimidine tract-binding protein
4 View Details [403..530] PSI-BLAST 11.522879 Polypyrimidine tract-binding protein
5 View Details [531..612] PSI-BLAST 9.69897 Splicing factor U2AF 65 KDa subunit

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • nucleic acid binding
  • 3.64594243387558 bayes_pls_golite062009
  • binding
  • 3.00411894202318 bayes_pls_golite062009
  • mRNA binding
  • 2.76744192669109 bayes_pls_golite062009
  • RNA binding
  • 2.41328743949172 bayes_pls_golite062009
  • protein binding
  • 1.12215421354121 bayes_pls_golite062009
  • transcription regulator activity
  • 0.737458867828906 bayes_pls_golite062009
  • DNA binding
  • 0.691258294213766 bayes_pls_golite062009
  • mRNA 3'-UTR binding
  • 0.599389001184667 bayes_pls_golite062009
  • translation regulator activity
  • 0.38120065819101 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
  • 0.128616879457381 bayes_pls_golite062009
  • structural molecule activity
  • 0.0829058000493267 bayes_pls_golite062009
    3
    Term Confidence Notes
  • nucleic acid binding
  • 3.64594243387558 bayes_pls_golite062009
  • binding
  • 3.00411894202318 bayes_pls_golite062009
  • mRNA binding
  • 2.76744192669109 bayes_pls_golite062009
  • RNA binding
  • 2.41328743949172 bayes_pls_golite062009
  • protein binding
  • 1.12215421354121 bayes_pls_golite062009
  • transcription regulator activity
  • 0.737458867828906 bayes_pls_golite062009
  • DNA binding
  • 0.691258294213766 bayes_pls_golite062009
  • mRNA 3'-UTR binding
  • 0.599389001184667 bayes_pls_golite062009
  • translation regulator activity
  • 0.38120065819101 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
  • 0.128616879457381 bayes_pls_golite062009
  • structural molecule activity
  • 0.0829058000493267 bayes_pls_golite062009
    4 No functions predicted.
    5 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle