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Protein Overview: SLK19

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run IPL1 No Comments Cheeseman IM, et al. (2002)
View Run SLK19 No Comments Cheeseman IM, et al. (2002)
View Run PAN1 No Comments Toshima J, et al (2006)
View Run PAN1 No Comments Toshima J, et al (2006)
View Run ZDS1 Sample 2- cpn2 from june 2005 McCusker D, et al (2007)
View Run ZDS1 Sample 3 - cpn + atp, from june 2005 McCusker D, et al (2007)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data SLK19 Sundin BA, et al. (2004)
View Data SLK19 Sundin BA, et al. (2004)
View Data SLK19 and SPC42 Huh WK, et al. (2003)
View Data SLK19 Huh WK, et al. (2003)

Protein Structure Data


[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..458] PSI-BLAST 33.69897 Heavy meromyosin subfragment
2 View Details [459..552] PSI-BLAST 11.09691 Tropomyosin
3 View Details [553..655] PSI-BLAST 11.09691 Tropomyosin
4 View Details [656..821] MSA 14.223995 View MSA. No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
3
Term Confidence Notes
  • transcription regulator activity
  • 4.03440533979709 bayes_pls_golite062009
  • DNA binding
  • 3.65811636468179 bayes_pls_golite062009
  • nucleic acid binding
  • 3.60537549931501 bayes_pls_golite062009
  • transcription factor activity
  • 3.22337383289465 bayes_pls_golite062009
  • binding
  • 2.87991790206998 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 2.1457670954804 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 1.87665013586148 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 1.77682537012597 bayes_pls_golite062009
  • actin binding
  • 1.48871115327078 bayes_pls_golite062009
  • transcription repressor activity
  • 1.34516545338213 bayes_pls_golite062009
  • transcription activator activity
  • 1.19647956161774 bayes_pls_golite062009
  • protein binding
  • 1.03780839342631 bayes_pls_golite062009
  • transcription factor binding
  • 0.86100194020002 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
  • 0.57258935872519 bayes_pls_golite062009
  • chromatin binding
  • 0.400813784720149 bayes_pls_golite062009
  • transcription cofactor activity
  • 0.33597123085446 bayes_pls_golite062009
  • actin filament binding
  • 0.26311995282891 bayes_pls_golite062009
  • centromeric DNA binding
  • 0.09491254824772 bayes_pls_golite062009
    4 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle