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Protein Overview: RPB2

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run RBA50 No Comments Hazbun TR, et al. (2003)
View Run YMR185W No Comments Hazbun TR, et al. (2003)
View Run TOR2 No Comments Reinke A, et al. (2004)
View Run RPA135 his-HA tag on RPA135 Schneider, DA, et al. (2006)
View Run RPA135 his-HA tag on RPA135 Schneider, DA, et al. (2006)
View Run RPA135 his-HA tag on RPA135 Schneider, DA, et al. (2006)
View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
View Run RPA135 No Comments Schneider, DA, et al. (2006)
View Run ZDS1 Sample 3 - cpn + atp, from june 2005 McCusker D, et al (2007)
View Run BOI1 Sample boi 1 with ha tag from october 2005 McCusker D, et al (2007)
View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
View Run MLP2 #02 Alpha Factor Prep1-TiO2 enriched, new search criteria Keck JM, et al. (2011)
View Run MLP2 #30 Asynchronous Prep6-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)
View Run MLP2 #11 Mitotic Prep1-TiO2 enriched, new search criteria Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

  BAIT PREY HITS PUBLICATION
View Screen RPB2 PPZ2 2 Unpublished Fields Lab Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data RPB2 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..220]
[398..551]
[598..750]
PSI-BLAST 11000.0 RBP2
2 View Details [221..397]
[552..597]
[751..1128]
PSI-BLAST 11000.0 RBP2
3 View Details [1129..1224] PSI-BLAST 11000.0 RBP2

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • DNA-directed RNA polymerase activity
  • 10.2021663255698 bayes_pls_golite062009
  • RNA polymerase activity
  • 10.2021663255698 bayes_pls_golite062009
  • nucleotidyltransferase activity
  • 7.6240729546188 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 6.31198922553685 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 5.44374972993429 bayes_pls_golite062009
  • transferase activity
  • 4.83218811360621 bayes_pls_golite062009
  • transcription regulator activity
  • 2.34884279395902 bayes_pls_golite062009
  • nucleic acid binding
  • 2.33174616086951 bayes_pls_golite062009
  • DNA binding
  • 2.27079409864244 bayes_pls_golite062009
  • binding
  • 1.73416306650822 bayes_pls_golite062009
  • RNA polymerase II transcription mediator activity
  • 1.53259746846673 bayes_pls_golite062009
  • catalytic activity
  • 1.36406839864424 bayes_pls_golite062009
  • RNA binding
  • 1.12618950637766 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.847783043631028 bayes_pls_golite062009
  • protein binding
  • 0.45174975126993 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle