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Protein Overview: VHS3

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run CAB3 No Comments Hazbun TR, et al. (2003)
View Run RPA135 No Comments Schneider, DA, et al. (2006)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..281] deduced N/A No confident structure predictions are available.
2 View Details [282..375] Pcons 1.88 4'-phosphopantothenoylcysteine decarboxylase (PPC decarboxylase, halotolerance protein Hal3a)
3 View Details [376..592] PSI-BLAST 371.9897 4'-phosphopantothenoylcysteine decarboxylase (PPC decarboxylase, halotolerance protein Hal3a)
4 View Details [593..674] deduced N/A No confident structure predictions are available.
5 View Details [574..674] PSI-BLAST 4.69897 Strucuture of the C-terminal domain of human thrombospondin-2

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
3 No functions predicted.
4
Term Confidence Notes
  • phosphopantothenoylcysteine decarboxylase activity
  • 3.86093811191169 bayes_pls_golite062009
  • phosphopantothenate--cysteine ligase activity
  • 2.64345867885176 bayes_pls_golite062009
  • carboxy-lyase activity
  • 1.79168084682693 bayes_pls_golite062009
  • catalytic activity
  • 1.51672397362026 bayes_pls_golite062009
  • carbon-carbon lyase activity
  • 1.03827559540394 bayes_pls_golite062009
  • binding
  • 0.69350040563585 bayes_pls_golite062009
  • protein binding
  • 0.003958060867923 bayes_pls_golite062009
    5 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.71

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle