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Protein Overview: HRB1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run MLP2 #24 Asynchronous Prep3-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)
View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..123] PSI-BLAST 109.512579 Poly(A)-binding protein
2 View Details [124..222] PSI-BLAST 75.770868 Nuclear ribonucleoprotein A1 (RNP A1, UP1)
3 View Details [223..337] PSI-BLAST 75.770868 Nuclear ribonucleoprotein A1 (RNP A1, UP1)
4 View Details [338..429] PSI-BLAST 49.9794 Neural RNA-binding protein Musashi-1

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • RNA binding
  • 6.01922154152081 bayes_pls_golite062009
  • mRNA binding
  • 4.4242122918002 bayes_pls_golite062009
  • binding
  • 3.19379300171257 bayes_pls_golite062009
  • nucleic acid binding
  • 2.34356093608328 bayes_pls_golite062009
  • single-stranded RNA binding
  • 2.32459056139943 bayes_pls_golite062009
  • poly-pyrimidine tract binding
  • 1.53870607671929 bayes_pls_golite062009
  • protein binding
  • 1.52056358240529 bayes_pls_golite062009
  • nucleic acid transmembrane transporter activity
  • 1.11467033780466 bayes_pls_golite062009
  • RNA transmembrane transporter activity
  • 1.11467033780466 bayes_pls_golite062009
  • transporter activity
  • 0.417047632648771 bayes_pls_golite062009
  • mRNA 3'-UTR binding
  • 0.414871108842203 bayes_pls_golite062009
  • transmembrane transporter activity
  • 0.288804044686487 bayes_pls_golite062009
  • poly-purine tract binding
  • 0.15653271757169 bayes_pls_golite062009
  • 0.147515630076636 bayes_pls_golite062009
  • structural molecule activity
  • 0.106871867442361 bayes_pls_golite062009
  • poly(A) RNA binding
  • 0.0459878286238641 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 0.00171911393626201 bayes_pls_golite062009
    3
    Term Confidence Notes
  • RNA binding
  • 6.01922154152081 bayes_pls_golite062009
  • mRNA binding
  • 4.4242122918002 bayes_pls_golite062009
  • binding
  • 3.19379300171257 bayes_pls_golite062009
  • nucleic acid binding
  • 2.34356093608328 bayes_pls_golite062009
  • single-stranded RNA binding
  • 2.32459056139943 bayes_pls_golite062009
  • poly-pyrimidine tract binding
  • 1.53870607671929 bayes_pls_golite062009
  • protein binding
  • 1.52056358240529 bayes_pls_golite062009
  • nucleic acid transmembrane transporter activity
  • 1.11467033780466 bayes_pls_golite062009
  • RNA transmembrane transporter activity
  • 1.11467033780466 bayes_pls_golite062009
  • transporter activity
  • 0.417047632648771 bayes_pls_golite062009
  • mRNA 3'-UTR binding
  • 0.414871108842203 bayes_pls_golite062009
  • transmembrane transporter activity
  • 0.288804044686487 bayes_pls_golite062009
  • poly-purine tract binding
  • 0.15653271757169 bayes_pls_golite062009
  • 0.147515630076636 bayes_pls_golite062009
  • structural molecule activity
  • 0.106871867442361 bayes_pls_golite062009
  • poly(A) RNA binding
  • 0.0459878286238641 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 0.00171911393626201 bayes_pls_golite062009
    4 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle