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Protein Overview: CLN1

Protein Complex Data

Mass Spectrometry Data

The following runs contain data for this protein:

  BAIT COMMENTS PUBLICATION
View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

  BAIT PREY HITS PUBLICATION
View Screen CDC28 CLN1 2 Unpublished Fields Lab Data
View Screen CDC28 CLN1 2 Unpublished Fields Lab Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data CLN1 Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..48]
[197..386]
PSI-BLAST 133.09691 Cyclin A
2 View Details [49..196] PSI-BLAST 133.09691 Cyclin A
3 View Details [387..546] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • cyclin-dependent protein kinase regulator activity
  • 6.12919068656167 bayes_pls_golite062009
  • cyclin-dependent protein kinase activity
  • 3.81462270101479 bayes_pls_golite062009
  • protein kinase regulator activity
  • 2.90083336559452 bayes_pls_golite062009
  • kinase regulator activity
  • 2.84789294954357 bayes_pls_golite062009
  • binding
  • 2.4204867358489 bayes_pls_golite062009
  • transcription regulator activity
  • 1.86024002251052 bayes_pls_golite062009
  • protein binding
  • 1.47106731485576 bayes_pls_golite062009
  • nucleic acid binding
  • 1.23878797237176 bayes_pls_golite062009
  • DNA binding
  • 1.18961617410859 bayes_pls_golite062009
  • enzyme regulator activity
  • 1.07025055509935 bayes_pls_golite062009
  • protein kinase activity
  • 0.957590284872001 bayes_pls_golite062009
  • kinase activity
  • 0.919118452831504 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 0.806564872314381 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
  • 0.671643397144957 bayes_pls_golite062009
  • hydrolase activity
  • 0.62079213929979 bayes_pls_golite062009
  • protein serine/threonine kinase activity
  • 0.567809158275482 bayes_pls_golite062009
  • transcription factor activity
  • 0.567104149291415 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 0.56301729141837 bayes_pls_golite062009
  • kinase binding
  • 0.451409627821468 bayes_pls_golite062009
  • transcription factor binding
  • 0.396734044657235 bayes_pls_golite062009
  • enzyme binding
  • 0.145967754156613 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle