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Protein Overview: RHO4

General Information:
Name(s) found: RHO4 / YKR055W [SGD]
Description(s) found:
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  • gi|6322908|ref|NP_012981.1| Non-essential small GTPase of the Rho/Rac subfamily of Ras-like proteins, likely to be involved in the establishment of cell polarity; Rho4p [Saccharomyces cerevisiae] [NCBI NR]
  • gi|486513|emb|CAA82133.1| RHO4 [Saccharomyces cerevisiae] [NCBI NR]
  • pir||S37743 probable GTP-binding protein RHO4 - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • gi|464610|sp|Q00246.2|RHO4_YEAST RecName: Full=GTP-binding protein RHO4; Flags: Precursor [NCBI NR]
  • gi|45269709|gb|AAS56235.1| YKR055W [Saccharomyces cerevisiae] [NCBI NR]
  • gi|397359|emb|CAA81020.1| rho protein [Saccharomyces cerevisiae] [NCBI NR]
  • GTP-binding protein RHO4 OS=Saccharomyces cerevisiae GN=RHO4 PE=1 SV=2 [Swiss-Prot]
  • RHO4 GTP-binding protein of the rho family [mips]
  • Non-essential small GTPase of the Rho/Rac subfamily of Ras-like proteins, likely to be involved in the establishment of cell polarity [SGD]
  • RHO4, Chr XI from 547853-548728 [yeast_orfs2]
  • Chr XI from 547853-548728 [yeastorf3.fasta]
  • (Q00246) RHO4 protein [4932.FASTACCERV.txt]
  • RHO4 SGDID:S0001763, Chr XI from 547858-548733, Verified ORF [yeastflysequest.fasta]
  • Non-essential small GTPase of the Rho/Rac subfamily of Ras-like proteins, likely to be involved in the establishment of cell polarity [Saccharomyces cerevisiae]gi|486513|emb|CAA82133.1| RHO4 [Saccharomyces cerevisiae]gi|397359|emb|CAA81020.1| rho protei [nrdb_11152004_Chlamydomonas]
  • RHO4 SGDID:S000001763, Chr XI from 547858-548733, Verified ORF, "Non-essential small GTPase of the Rho/Rac subfamily of Ras-like proteins, likely to be involved in the establishment of cell polarity" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta]
  • YKR055W [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • RHO4 [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • rho protein [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • Protein RHO4 [nr-271106-contam.fasta]
  • Non-essential small GTPase of the Rho/Rac subfamily of Ras-like proteins, likely to be involved in the establishment of cell polarity; Rho4p [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • [chemostatdb.fasta]
  • GTP-binding protein RHO4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RHO4 PE=1 SV=2 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta]
  • RHO4 SGDID:S000001763, Chr XI from 548216-549091, Genome Release 64-1-1, Verified ORF, "Non-essential small GTPase of the Rho/Rac subfamily of Ras-like proteins, likely to be involved in the establishment of cell polarity" [yeast-030211-contam.fasta]
  • RHO4 SGDID:S000001763, Chr XI from 548216-549091, Genome Release 64-2-1, Verified ORF, "Non-essential small GTPase; member of the Rho/Rac subfamily of Ras-like proteins; likely to be involved in the establishment of cell polarity; has long N-terminal extension that plays an important role in Rho4p function and is shared with Rho4 homologs in other yeasts and filamentous fungi" [20141208_orf_trans.fasta]
  • YKR055W SGDID:S000001763, Chr XI from 548216-549091, Genome Release 64-1-1, Verified ORF, "Non-essential small GTPase of the Rho/Rac subfamily of Ras-like proteins, likely to be involved in the establishment of cell polarity" [2016-01-SGD_Yeast_Contam_Riffle_20140507-Ska-Hec-110-tubulin.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 291 amino acids

    Gene Ontology:
    Cellular Component: intracellular [TASLink to PubMed article]
    Biological Process: small GTPase mediated signal transduction [ISSLink to PubMed article]
    actin filament organization [TASLink to PubMed article]
    Molecular Function: GTPase activity [ISSLink to PubMed article]
    signal transducer activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTLLFKRKG GNCGNESNIV SQGSPSSSNL PESPGTLDEK NLPRLPTPFA RSLSTIPSYE  60
   61 QMKRTNKLPD YHLKIVVVGD GAVGKTCLLI SYVQGTFPTD YIPTIFENYV TNIEGPNGQI 120
  121 IELALWDTAG QEEYSRLRPL SYTNADVLMV CYSVGSKTSL KNVEDLWFPE VKHFCPSTPI 180
  181 MLVGLKSDLY EADNLSDLVE PSSAESLAKR LGAFAHIQCS ARLKENIDEV FETAIHTLLS 240
  241 DSLYAPREPT HTIKNPFKRN TTRSDIDSST GDTSVSISGT KRLRKNKCII M

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Ho Y, et al. (2002) RHO4 URA1

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #12 Mitotic Prep1-TiO2 Flowthrough Keck JM, et al. (2011)
    View Run MLP2 #02 Alpha Factor Prep1-TiO2 enriched, new search criteria Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen RHO4 NAS2 2 Drees BL, et al. (2001)
    View Screen RHO4 BEM4 2 Uetz P, et al. (2000)
    View Screen RHO4 BEM4 2 Unpublished Fields Lab Data
    View Screen RHO4 CMR2 1 Unpublished Fields Lab Data
    View Screen RHO4 KEX1 1 Unpublished Fields Lab Data
    View Screen RHO4 FPK1 1 Unpublished Fields Lab Data
    View Screen RHO4 RPB2 1 Unpublished Fields Lab Data
    View Screen RHO4 HAP2 1 Unpublished Fields Lab Data
    View Screen RHO4 NDJ1 1 Unpublished Fields Lab Data
    View Screen RHO4 IST2 1 Unpublished Fields Lab Data
    View Screen RHO4 ULS1 1 Unpublished Fields Lab Data
    View Screen RHO4 SPT4 1 Unpublished Fields Lab Data
    View Screen RHO4 PAP2 1 Unpublished Fields Lab Data
    View Screen RHO4 PAR32 1 Unpublished Fields Lab Data
    View Screen RHO4 YOR392W 1 Unpublished Fields Lab Data
    View Screen RHO4 ORC6 1 Unpublished Fields Lab Data
    View Screen RHO4 INP53 1 Unpublished Fields Lab Data
    View Screen RHO4 PTP1 1 Unpublished Fields Lab Data
    View Screen RHO4 DBP1 1 Unpublished Fields Lab Data
    View Screen RHO4 YOR131C 1 Unpublished Fields Lab Data
    View Screen RHO4 GDA1 1 Unpublished Fields Lab Data
    View Screen RHO4 AIM44 1 Unpublished Fields Lab Data
    View Screen RHO4 CYR1 1 Unpublished Fields Lab Data
    View Screen RHO4 KTR6 1 Unpublished Fields Lab Data
    View Screen RHO4 AST2 1 Unpublished Fields Lab Data
    View Screen RHO4 YJL144W 1 Unpublished Fields Lab Data
    View Screen RHO4 YER158C 1 Unpublished Fields Lab Data
    View Screen RHO4 NAT3 1 Unpublished Fields Lab Data
    View Screen RHO4 IDS2 1 Unpublished Fields Lab Data
    View Screen RHO4 YPL264C 1 Unpublished Fields Lab Data
    View Screen RHO4 YGR107W 1 Unpublished Fields Lab Data
    View Screen RHO4 JIP5 1 Unpublished Fields Lab Data
    View Screen RHO4 LAS1 1 Unpublished Fields Lab Data
    View Screen CTF13 RHO4 1 Unpublished Fields Lab Data
    View Screen RHO4 TPM2 1 Unpublished Fields Lab Data
    View Screen RHO4 YPR174C 1 Unpublished Fields Lab Data
    View Screen RHO4 PAU17 1 Unpublished Fields Lab Data
    View Screen RHO4 UBX6 1 Unpublished Fields Lab Data
    View Screen RHO4 YBR204C 1 Unpublished Fields Lab Data
    View Screen RHO4 CHA4 1 Unpublished Fields Lab Data
    View Screen RHO4 YIL172C, FSP2 1 Unpublished Fields Lab Data
    View Screen RHO4 DUG2 1 Unpublished Fields Lab Data
    View Screen RHO4 ATP10 1 Unpublished Fields Lab Data
    View Screen RHO4 SPT23 1 Unpublished Fields Lab Data
    View Screen RHO4 SAT4 1 Unpublished Fields Lab Data
    View Screen RHO4 NTE1 1 Unpublished Fields Lab Data
    View Screen RHO4 YKL023W 1 Unpublished Fields Lab Data
    View Screen RHO4 CDC36 1 Unpublished Fields Lab Data
    View Screen RHO4 TEP1 1 Unpublished Fields Lab Data
    View Screen RHO4 YML020W 1 Unpublished Fields Lab Data
    View Screen RHO4 SNT2 1 Unpublished Fields Lab Data
    View Screen RHO4 NAM9 1 Unpublished Fields Lab Data
    View Screen RHO4 NUP53 1 Unpublished Fields Lab Data
    View Screen RHO4 NUT1 1 Unpublished Fields Lab Data
    View Screen RHO4 STB1 1 Unpublished Fields Lab Data

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data RHO4 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..62] deduced N/A No confident structure predictions are available.
    2 View Details [63..291] PSI-BLAST 559.927757 RhoA


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle