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Protein Overview: ATP7

General Information:
Name(s) found: ATP7 / YKL016C [SGD]
Description(s) found:
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  • pir||A41168 H+-transporting two-sector ATPase (EC 3.6.3.14) chain d - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • gi|6322836|ref|NP_012909.1| Subunit d of the stator stalk of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily conserved enzyme complex required for ATP synthesis; Atp7p [Saccharomyces cerevisiae] [NCBI NR]
  • gi|486005|emb|CAA81851.1| ATP7 [Saccharomyces cerevisiae] [NCBI NR]
  • gi|45270588|gb|AAS56675.1| YKL016C [Saccharomyces cerevisiae] [NCBI NR]
  • gi|399076|sp|P30902.2|ATP7_YEAST RecName: Full=ATP synthase subunit d, mitochondrial [NCBI NR]
  • gi|395254|emb|CAA52265.1| unnamed protein product [Saccharomyces cerevisiae] [NCBI NR]
  • gi|171112|gb|AAA34445.1| ATP synthase d subunit [Saccharomyces cerevisiae] [NCBI NR]
  • ATP synthase subunit d, mitochondrial OS=Saccharomyces cerevisiae GN=ATP7 PE=1 SV=2 [Swiss-Prot]
  • ATP7 F1F0-ATPase complex, FO D subunit [mips]
  • Subunit d of the stator stalk of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily conserved enzyme complex required for ATP synthesis [SGD]
  • ATP7, Chr XI from 407103-407627, reverse complement [yeast_orfs2]
  • Chr XI from 407103-407627, reverse complement [yeastorf3.fasta]
  • Chr XI from 407627-407103, reverse complement [yeastorf5.fasta]
  • ATP7 SGDID:S0001499, Chr XI from 407632-407108, reverse complement, Verified ORF [yeastflysequest.fasta]
  • Atp7p [Saccharomyces cerevisiae]gi|486005|emb|CAA81851.1| ATP7 [Saccharomyces cerevisiae]gi|395254|emb|CAA52265.1| unnamed protein product [Saccharomyces cerevisiae]gi|45270588|gb|AAS56675.1| YKL016C [Saccharomyces cerevisiae]gi|83056|pir||A41168 H+-t [nrdb_11152004_Chlamydomonas]
  • ATP7 SGDID:S000001499, Chr XI from 407632-407108, reverse complement, Verified ORF, "Subunit d of the stator stalk of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily conserved enzyme complex required for ATP synthesis" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta]
  • Subunit d of the stator stalk of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily conserved enzyme complex required for ATP synthesis; Atp7p [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • ATP synthase d subunit [nr-271106-contam.fasta]
  • unnamed protein product [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • YKL016C [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • ATP synthase D chain, mitochondrial [nr-271106-contam.fasta]
  • ATP7 [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • [chemostatdb.fasta]
  • ATP synthase subunit d, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ATP7 PE=1 SV=2 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta]
  • ATP7 SGDID:S000001499, Chr XI from 407989-407465, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit d of the stator stalk of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily conserved enzyme complex required for ATP synthesis" [yeast-030211-contam.fasta]
  • ATP7 SGDID:S000001499, Chr XI from 407989-407465, Genome Release 64-2-1, reverse complement, Verified ORF, "Subunit d of the stator stalk of mitochondrial F1F0 ATP synthase; F1F0 ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis" [20141208_orf_trans.fasta]
  • YKL016C SGDID:S000001499, Chr XI from 407989-407465, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit d of the stator stalk of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily conserved enzyme complex required for ATP synthesis" [2016-01-SGD_Yeast_Contam_Riffle_20140507-Ska-Hec-110-tubulin.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 174 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial proton-transporting ATP synthase, stator stalk [IMPLink to PubMed article][ISSLink to PubMed article]
    mitochondrion [IDALink to PubMed article]
    Biological Process: protein complex assembly [IMPLink to PubMed article][IPILink to PubMed article]
    ATP synthesis coupled proton transport [IMPLink to PubMed article][ISSLink to PubMed article]
    Molecular Function: hydrogen ion transporting ATP synthase activity, rotational mechanism [IMPLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLAKSAANK LDWAKVISSL RITGSTATQL SSFKKRNDEA RRQLLELQSQ PTEVDFSHYR  60
   61 SVLKNTSVID KIESYVKQYK PVKIDASKQL QVIESFEKHA MTNAKETESL VSKELKDLQS 120
  121 TLDNIQSARP FDELTVDDLT KIKPEIDAKV EEMVKKGKWD VPGYKDRFGN LNVM

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details (MIPS) Mewes HW, et al. (2004) ATP1 ATP14 ATP15 ATP16 ATP17 ATP18 ATP19 ATP2 ATP20 ATP3 ATP4 ATP5 ATP6 ATP7 ATP8 INH1 OLI1 TIM11
    View Details Ho Y, et al. (2002) ADK1 ATP3 ATP5 ATP7 CDC14 DPM1 FUR1 GLC7 HEF3 HMS1 MCR1 SNF4 SPE3 SSZ1 TPS1 TSA2 VAS1
    View Details Qiu et al. (2008) ATP1 ATP14 ATP15 ATP16 ATP17 ATP18 ATP19 ATP2 ATP20 ATP3 ATP4 ATP5 ATP6 ATP7 ATP8 COB COX1 COX12 COX13 COX2 COX3 COX4 COX5A COX5B COX6 COX7 COX8 COX9 INH1 MIR1 OLI1 QCR10 QCR7 QCR8 RIP1 STF1 STF2

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run YNL260C No Comments Hazbun TR, et al. (2003)
    View Run NAF1 No Comments Hazbun TR, et al. (2003)
    View Run CWC2 No Comments Hazbun TR, et al. (2003)
    View Run ALG13 No Comments Hazbun TR, et al. (2003)
    View Run YMR185W No Comments Hazbun TR, et al. (2003)
    View Run NAF1 No Comments Hazbun TR, et al. (2003)
    View Run MIA40 No Comments Hazbun TR, et al. (2003)
    View Run SEC10 No Comments De Craene, J., et al. (2006)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data ATP7 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..101] Pcons 1.68 Tropomyosin
    2 View Details [102..174] Pcons 1.68 Tropomyosin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrogen ion transmembrane transporter activity
    		•  10.7183160834782 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  8.97596713760839 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  7.90597892679083 bayes_pls_golite062009
  • hydrogen-exporting ATPase activity, phosphorylative mechanism
    		•  6.1125687610116 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  4.22395118867988 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  4.14778831333857 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.77987144158593 bayes_pls_golite062009
  • transporter activity
    		•  2.17343635031853 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.0392528625188 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.96541207125766 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism
    		•  1.93539847256373 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of ions
    		•  1.72052571762598 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  1.46705756526037 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  1.40154328896132 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  1.38474091052441 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  1.38237845949685 bayes_pls_golite062009
  • ATPase activity
    		•  1.3807805914732 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  0.799499441674651 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  0.793051451246261 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.769001631826172 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  0.763828049556794 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  0.760339273021048 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  0.760299009322944 bayes_pls_golite062009
  • catalytic activity
    		•  0.534516847146079 bayes_pls_golite062009
  • hydrolase activity
    		•  0.463638383758448 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  0.334578049419841 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle