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Protein Overview: ATG27

General Information:
Name(s) found: ATG27 / YJL178C [SGD]
Description(s) found:
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  • gi|45270392|gb|AAS56577.1| YJL178C [Saccharomyces cerevisiae] [NCBI NR]
  • sp|P46989|YJR8_YEAST Hypothetical 21.6 kDa protein in ATP12-RPL17B intergenic region [NCBI NR]
  • pir||S56961 probable membrane protein YJL178c - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • gi|1008378|emb|CAA89473.1| unnamed protein product [Saccharomyces cerevisiae] [NCBI NR]
  • (P46989) Hypothetical 21.6 kDa protein in ATP12-RPL17B intergenic region [Swiss-Prot]
  • hypothetical protein [mips]
  • Type I membrane protein involved in autophagy and the cytoplasm-to-vacuole targeting (Cvt) pathway; may be involved in membrane delivery to the phagophore assembly site [SGD]
  • YJL178C, Chr X from 89280-89870, reverse complement [yeast_orfs2]
  • Chr X from 89280-89870, reverse complement [yeastorf3.fasta]
  • Chr X from 89870-89280, reverse complement [yeastorf5.fasta]
  • unnamed protein product [Saccharomyces cerevisiae]gi|45270392|gb|AAS56577.1| YJL178C [Saccharomyces cerevisiae]gi|1078257|pir||S56961 probable membrane protein YJL178c - yeast (Saccharomyces cerevisiae)gi|1353036|sp|P46989|YJR8_YEAST Hypothetical 21.6 [nrdb_11152004_Chlamydomonas]
  • YJL178C [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • unnamed protein product [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 196 amino acids

    Gene Ontology:
    Cellular Component: pre-autophagosomal structure [IDALink to PubMed article]
    mitochondrion [IDALink to PubMed article]
    membrane [IDALink to PubMed article][ISSLink to PubMed article]
    Golgi apparatus [IDALink to PubMed article]
    Biological Process: vesicle organization [IMPLink to PubMed article]
    autophagy [IMPLink to PubMed article]
    Molecular Function: protein kinase regulator activity [IMPLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLCGLTDVIL PGKDAITTQI IDFDKNIGFN VEETESALTL TLKGATWGAN SFDAKLEFQC  60
   61 NDNMKQDELT SHTWADKSIQ LTLKGPSGCL KSKDDDKKNG DGDNGKDGDS EGKKPAKKAG 120
  121 GTSWFTWLFL YALLFTLIYL MVVSFLNTRG GSFQDFRAEF IQRSTQFLTS LPEFCKEVVS 180
  181 RILGRSTAQR GGYSAV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..196] deduced N/A No confident structure predictions are available.
    2 View Details [100..196] Pfam 3.619789 No description for PF09451.1 was found. Confident ab initio structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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    Created and Maintained by: Michael Riffle