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Protein Overview: YDL012C

General Information:
Name(s) found: YDL012C [SGD]
Description(s) found:
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  • gi|74676609|sp|Q12489.1|YD012_YEAST RecName: Full=Uncharacterized protein YDL012C [NCBI NR]
  • gi|683685|emb|CAA88347.1| D2880 [Saccharomyces cerevisiae] [NCBI NR]
  • gi|6320192|ref|NP_010272.1| Plasma membrane protein of unknown function; YDL012C is not an essential gene; Ydl012cp [Saccharomyces cerevisiae] [NCBI NR]
  • gi|1430975|emb|CAA98569.1| unnamed protein product [Saccharomyces cerevisiae] [NCBI NR]
  • pir||S52507 probable membrane protein YDL012c - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • Uncharacterized protein YDL012C OS=Saccharomyces cerevisiae GN=YDL012C PE=1 SV=1 [Swiss-Prot]
  • Protein of unknown function localised to cell periphery [mips]
  • Plasma membrane protein of unknown function; may contribute to Non-homologous end-joining (NHEJ) based on double deletion with htz1; YDL012C is not an essential gene [SGD]
  • YDL012C, Chr IV from 431104-431148,431235-431513, reverse complement [yeast_orfs2]
  • Chr IV from 431104-431148,431235-431513, reverse complement [yeastorf3.fasta]
  • Chr IV from 431513-431469,431382-431104, reverse complement [yeastorf5.fasta]
  • >Q12489 (Q12489) Chromosome IV reading frame ORF YDL012C [4932.FASTACCERV.txt]
  • YDL012C SGDID:S0002170, Chr IV from 431514-431470,431383-431105, reverse complement, Uncharacterized ORF [yeastflysequest.fasta]
  • Plasma membrane protein of unknown function [Saccharomyces cerevisiae]gi|1430975|emb|CAA98569.1| unnamed protein product [Saccharomyces cerevisiae]gi|683685|emb|CAA88347.1| D2880 [Saccharomyces cerevisiae]gi|1077247|pir||S52507 probable membrane protei [nrdb_11152004_Chlamydomonas]
  • (Q12489) S.cerevisiae chromosome IV reading frame ORF YDL012c (D2880) [cerv4932.FASTAC]
  • YDL012C SGDID:S000002170, Chr IV from 431514-431470,431383-431105, reverse complement, Uncharacterized ORF, "Plasma membrane protein of unknown function" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta]
  • YDL012C SGDID:S000002170, Chr IV from 431514-431470,431383-431105, reverse complement, Uncharacterized ORF, "Plasma membrane protein of unknown function; YDL012C is not an essential gene" [yeast-contam.fasta]
  • YDL012C SGDID:S000002170, Chr IV from 431515-431471,431384-431106, reverse complement, Uncharacterized ORF, "Plasma membrane protein of unknown function; YDL012C is not an essential gene" [SGD_S-cerevisiae_na_08-19-2008_con_reversed.fasta]
  • YDL012C SGDID:S000002170, Chr IV from 431515-431471,431384-431106, reverse complement, Uncharacterized ORF, "Plasma membrane protein of unknown function; may contribute to Non-homologous end-joining (NHEJ) based on double deletion with htz1; YDL012C is no [yeast-200209-contam.fasta]
  • Plasma membrane protein of unknown function; YDL012C is not an essential gene; Ydl012cp [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • Uncharacterized protein YDL012C [nr-271106-contam.fasta]
  • unnamed protein product [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • D2880 [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • YDL012C SGDID:S000002170, Chr IV from 431515-431471,431384-431106, reverse complement, Uncharacterized ORF, "Plasma membrane protein of unknown function; may contribute to Non-homologous end-joining (NHEJ) based on double deletion with htz1; YDL012C is not an essential gene" [yeast-bovrabprots.fasta]
  • [chemostatdb.fasta]
  • Uncharacterized protein YDL012C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDL012C PE=1 SV=1 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta]
  • YDL012C SGDID:S000002170, Chr IV from 431386-431108,431517-431473, Genome Release 64-1-1, reverse complement, Verified ORF, "Tail-anchored plasma membrane protein containing a conserved CYSTM module, possibly involved in response to stress; may contribute to non-homologous end-joining (NHEJ) based on ydl012c htz1 double null phenotype" [yeast-030211-contam.fasta]
  • YDL012C SGDID:S000002170, Chr IV from 431386-431108,431517-431473, Genome Release 64-2-1, reverse complement, Verified ORF, "Tail-anchored plasma membrane protein with a conserved CYSTM module; possibly involved in response to stress; may contribute to non-homologous end-joining (NHEJ) based on ydl012c htz1 double null phenotype; YDL012C has a paralog, YBR016W, that arose from the whole genome duplication" [20141208_orf_trans.fasta]
  • TR3450|c0_g1_i1|g.2477 ORF TR3450|c0_g1_i1|g.2477 TR3450|c0_g1_i1|m.2477 type:complete len:108 (+) TR3450|c0_g1_i1:625-948(+) [Y12_S_cerevisiae-Sep2015-contam.fasta]
  • TR5163|c0_g1_i1|g.3440 ORF TR5163|c0_g1_i1|g.3440 TR5163|c0_g1_i1|m.3440 type:complete len:108 (+) TR5163|c0_g1_i1:549-872(+) [DBVPG6044_S_cerevisiae-Sep2015-contam.fasta]
  • asmbl_1006|g.64 ORF asmbl_1006|g.64 asmbl_1006|m.64 type:complete len:108 (+) asmbl_1006:541-864(+) [DBVPG6044_Trinity_v2_2_0_PASA_6May2016-contam.fasta]
  • asmbl_168|g.231 ORF asmbl_168|g.231 asmbl_168|m.231 type:complete len:108 (+) asmbl_168:622-945(+) [Y12_Trinity_v2_2_0_PASA_6May2016-contam.fasta]
  • Cysteine-rich and transmembrane domain-containing protein YDL012C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDL012C PE=1 SV=1 [uniprot_sprot.fasta.20160308]
  • ID=asmbl_1011|g.548 ORF ID=asmbl_1011|g.548 ID=asmbl_1011|m.548 type:complete len:108 (+) ID=asmbl_1011:537-860(+) [DBVPG6044_quiverGenomes_Trinity_v2_2_0_PASA_2June2016-contam.fasta]
  • ID=asmbl_169|g.221 ORF ID=asmbl_169|g.221 ID=asmbl_169|m.221 type:complete len:108 (+) ID=asmbl_169:625-948(+) [Y12_quiver_Trinity_v2_2_0_PASA_2June2016-contam.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 107 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAQDYYGNS ASKQSYSRPS APPPGYETAS RGYAPSQSQQ NYYPPQQQQQ QYQQQPQYYQ  60
   61 QQQPQYYQQH PQQPIYVQQQ PASSGNEDCL AGCLAGLCLC CTLDMLF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YDL012C Huh WK, et al. (2003)

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..107] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle