YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: IMD1

General Information:
Name(s) found: IMD1 / YAR073W [SGD]
Description(s) found:
SHOW ONLY BEST
  • gi|731323|sp|P39567.1|IMDH1_YEAST RecName: Full=Putative inosine-5'-monophosphate dehydrogenase IMD1; Short=IMP dehydrogenase; Short=IMPDH; Short=IMPD [NCBI NR]
  • gi|6319352|ref|NP_009435.1| Nonfunctional protein with homology to IMP dehydrogenase; IMD1 is a probable pseudogene that is located close to the telomere and is not expressed at detectable levels; Imd1p [Saccharomyces cerevisiae] [NCBI NR]
  • gi|456156|gb|AAC09509.1| Yar073wp [Saccharomyces cerevisiae] [NCBI NR]
  • pir||S53477 IMP dehydrogenase (EC 1.1.1.205) [similarity] - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • Putative inosine-5'-monophosphate dehydrogenase IMD1 OS=Saccharomyces cerevisiae GN=IMD1 PE=5 SV=1 [Swiss-Prot]
  • (P39567) Probable inosine-5'-monophosphate dehydrogenase IMD1 (EC 1.1.1.205) (IMP dehydrogenase) (IMPDH) (IMPD) [Swiss-Prot]
  • IMD1 Non functional IMP dehydrogenases homolog, probable pseudogene [mips]
  • [DUBIOUS] Nonfunctional protein with homology to IMP dehydrogenase; probable pseudogene, located close to the telomere; is not expressed at detectable levels; YAR073W and YAR075W comprise a continuous reading frame in some strains of S. cerevisiae [SGD]
  • IMD1, Chr I from 227728-228939 [yeast_orfs2]
  • Chr I from 227728-228939 [yeastorf3.fasta]
  • Chr I from 227732-228943 [yeastorf4.fasta]
  • Chr I from 227733-228944 [yeastorf5.fasta]
  • IMD1 SGDID:S0000095, Chr I from 227735-228946, Verified ORF [yeastflysequest.fasta]
  • IMD1 SGDID:S0000095, Chr I from 227733-228944, Verified ORF [10112005cervSGD.fasta]
  • Yar073wp [Saccharomyces cerevisiae]gi|6319352|ref|NP_009435.1| Imd1p [Saccharomyces cerevisiae]gi|731323|sp|P39567|IMD1_YEAST Probable inosine-5'-monophosphate dehydrogenase IMD1 (IMP dehydrogenase) (IMPDH) (IMPD)gi|1078491|pir||S53477 IMP dehydrogenas [nrdb_11152004_Chlamydomonas]
  • IMD1 SGDID:S000000095, Chr I from 227733-228944, Verified ORF, "Nonfunctional protein with homology to IMP dehydrogenase; IMD1 is a probable pseudogene that is located close to the telomere and is not expressed at detectable levels" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta]
  • IMD1 SGDID:S000000095, Chr I from 227733-228944, Dubious ORF, "Nonfunctional protein with homology to IMP dehydrogenase; probable pseudogene, located close to the telomere; is not expressed at detectable levels; YAR073W and YAR075W comprise a continuous r [yeast-contam.fasta]
  • Probable inosine-5'-monophosphate dehydrogenase IMD1 (IMP dehydrogenase) (IMPDH) (IMPD) [nr-271106-contam.fasta]
  • Yar073wp [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • IMD1 SGDID:S000000095, Chr I from 227733-228944, Dubious ORF, "Nonfunctional protein with homology to IMP dehydrogenase; probable pseudogene, located close to the telomere; is not expressed at detectable levels; YAR073W and YAR075W comprise a continuous reading frame in some strains of S. cerevisiae" [yeast-bovrabprots.fasta]
  • [chemostatdb.fasta]
  • Putative inosine-5'-monophosphate dehydrogenase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IMD1 PE=5 SV=1 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta]
  • IMD1 SGDID:S000000095, Chr I from 227742-228953, Genome Release 64-1-1, Dubious ORF, "Nonfunctional protein with homology to IMP dehydrogenase; probable pseudogene, located close to the telomere; is not expressed at detectable levels; YAR073W and YAR075W comprise a continuous reading frame in some strains of S. cerevisiae" [yeast-030211-contam.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 403 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAIRDYKTA LDLTKSLPRP DGLSVQELMD SKIRGGLAYN DFLILPGLVD FASSEVSLQT  60
   61 KLTRNITLNI PLVSSPMDTV TESEMATFMA LLDGIGFIHH NCTPEDQADM VRRVKNYENG 120
  121 FINNPIVISP TTTVGEAKSM KEKYGFAGFP VTADGKRNAK LVGAITSRDI QFVEDNSLLV 180
  181 QDVMTKNPVT GAQGITLSEG NEILKKIKKG RLLVVDEKGN LVSMLSRTDL MKNQKYPLAS 240
  241 KSANTKQLLW GASIGTMDAD KERLRLLVKA GLDVVILDSS QGNSIFQLNM IKWIKETFPD 300
  301 LEIIAGNVVT KEQAANLIAA GADGLRIGMG TGSICITQKV MACGRPQGTA VYNVCEFANQ 360
  361 FGVPCMADGG VQKHWSYYYQ SFGSWFFYCY DGWYVGRYYR ITR

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Riffle et al. (2010) (Unpublished Data) FUN12 IMD1 IMD2 IMD3 IMD4 KRE33 RPL10 RPL15A RPL20B RPL4B RPL5 RPL8A RPP0 RPS11A, RPS11B RPS1B RPS3 RPS4B, RPS4A RPS5 RPS6A, RPS6B RPS7A UTP22 YAR075W
    View Details Krogan NJ, et al. (2006) COX18 IMD1 IMD2 IMD3 IMD4 PDE2 YAR075W
    View Details Ho Y, et al. (2002) AIR1 AIR2 CBF5 CBP2 CCM1 CDC33 CIC1 DBP7 ENP2 GBP2 HAS1 HHF1, HHF2 HMO1 HTB2 IMD1 IMD3 IMD4 ISA1 KRE33 KRI1 MGM101 MSS116 MTR4 NAP1 NOC2 NOP12 NOP53 NOP56 NOP6 NPL3 PAP2 PET127 POL5 PRP43 PSE1 PUF6 PWP1 RLI1 RRP12 RRP5 SMC6 SRP1 TIF4631 TRA1 TSR1 URB1 URB2 UTP10 UTP20 YPP1 YRA1 YTM1

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run PSF2 No Comments Hazbun TR, et al. (2003)
    View Run RPA135 his-HA tag on RPA135 Schneider, DA, et al. (2006)
    View Run RPA135 his-HA tag on RPA135 Schneider, DA, et al. (2006)
    View Run MIH1 control 1 McCusker D, et al (2007)
    View Run MIH1 control 2 McCusker D, et al (2007)
    View Run ZDS1 Sample 2- cpn2 from june 2005 McCusker D, et al (2007)
    View Run BOI1 Sample boi 1 with ha tag from october 2005 McCusker D, et al (2007)
    View Run BOI1 Sample boi1 with gst from october 2005 McCusker D, et al (2007)
    View Run BOI1 Sample bob1 (2nd set) from october 2005 McCusker D, et al (2007)
    View Run BOI2 Boi 2 gst control McCusker D, et al (2007)
    View Run None Entered #17 Mitotic Prep3-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen IMD1 YIR014W 2 Unpublished Fields Lab Data
    View Screen IMD1 CPR6 2 Unpublished Fields Lab Data
    View Screen IMD1 HSM3 2 Unpublished Fields Lab Data
    View Screen IMD1 SMA1 2 Unpublished Fields Lab Data
    View Screen IMD1 GIP3 2 Unpublished Fields Lab Data
    View Screen IMD1 SIP2 2 Unpublished Fields Lab Data
    View Screen IMD1 SSO1 2 Unpublished Fields Lab Data

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..403] PSI-BLAST 1285.0 Inosine monophosphate dehydrogenase (IMPDH)


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle