General Information: |
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Name(s) found: |
SMC3_ARATH
[Swiss-Prot]
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Description(s) found:
SHOW ONLY BEST |
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Organism: | Arabidopsis thaliana |
Length: | 1204 amino acids |
Gene Ontology: |
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Cellular Component: |
nucleus
[ISS]
cohesin complex [ISS] |
Biological Process: |
sister chromatid cohesion
[IMP]
chromosome segregation [ISS] |
Molecular Function: |
ATP binding
[IEA][ISS]
protein binding [IEA] |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MFIKQVIIEG FKSYKEQVAT EEFSNKVNCV VGANGSGKSN FFHAIRFVLS DIYQNLRSED 60 61 RHALLHEGAG HQVVSAFVEI VFDNSDNRFP VDKEEIRLRR TVGLKKDDYF LDGKHITKGE 120 121 VMNLLESAGF SRANPYYVVQ QGKIASLTLM KDIERLDLLK EIGGTRVYEE RRRESLRIMQ 180 181 ETGNKRKQII EVVHYLDERL RELDEEKEEL RKYQQLDKQR KSLEYTIYDK ELHDAREKLE 240 241 QVEVARTKAS EESTKMYDRV EKAQDDSKSL DESLKELTKE LQTLYKEKET VEAQQTKALK 300 301 KKTKLELDVK DFQDRITGNI QSKNDALEQL NTVEREMQDS LRELEAIKPL YESQVDKENQ 360 361 TSKRINELEK TLSILYQKQG RATQFSNKAA RDKWLRKEIE DLKRVLDSNT VQEQKLQDEI 420 421 LRLNTDLTER DEHIKKHEVE IGELESRISK SHELFNTKKR ERDEEQRKRK EKWGEESQLS 480 481 SEIDKLKTEL ERAKKNLDHA TPGDVRRGLN SIRRICADYR INGVFGPLVE LVDCDEKFFT 540 541 AVEVTAGNSL FNVVVENDDI STKIIRHLNS LKGGRVTFLP LNRIKAPRVN YPKDSDAIPL 600 601 LKKLKFDSKF EPALGQVFGR TVVCRDLNVA TRVAKNDDLD CITMEGDQVS RKGGMTGGFY 660 661 DHRRSKLRFM NIIMQNTKSI NEKEKELEDV RRQLQVIDQQ ITQLVTEQQR LEADWTLCKL 720 721 QVEQLKQEIA NANKQKHAIH KAIEYKEKLL GDIRTRIDQV RSSMSMKEAE MGTELVDHLT 780 781 PEEREQLSKL NPEIKDLKEK KFAYQADRIE RETRKAELEA NIATNLKRRI TELQATIASI 840 841 DDDSLPSSAG TKEQELDDAK LSVNEAAKEL KSVCDSIDEK TKQIKKIKDE KAKLKTLEDD 900 901 CKGTLQDLDK KLEELFSLRN TLLAKQDEYT KKIRGLGPLS SDAFDTYKRK NIKELQKMLH 960 961 RCSEQLQQFS HVNKKALDQY VNFTEQREEL QNRQAELDAG DEKIKELITV LDQRKDESIE1020 1021 RTFKGVAHHF RDVFSELVQD GYGNLIIMKK KDLDNDDEDD DDDDGGREAV TEGRVEKYIG1080 1081 VKVKVSFTGQ GETQLMKQLS GGQKTVVALA LIFAIQRCDP APFYLFDEID AALDPQYRTA1140 1141 VGNLIRRLAD DYGTQFITTT FRPELVRVAD KIYGVFHKNR VSIVNVISKD QALDFIEKDQ1200 1201 SHDT |
SHOWING SINGLE HITS. [ Hide Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..66] | 46.522879 | Structural biochemistry of ATP-driven dimerization and DNA stimulated activation of SMC ATPases. | |
2 | View Details | [67..361] | 21.30103 | Heavy meromyosin subfragment | |
3 | View Details | [362..477] | 10.30103 | Tropomyosin | |
4 | View Details | [478..676] | 11.0 | Smc hinge domain | |
5 | View Details | [677..947] | 11.0 | Tropomyosin | |
6 | View Details | [948..1014] | 7.522879 | No description for 2dfsA was found. | |
7 | View Details | [1015..1204] | 23.69897 | Structural biochemistry of ATP-driven dimerization and DNA stimulated activation of SMC ATPases. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)