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Protein Overview: sv-PH

General Information:
Name(s) found: sv-PH / FBpp0099751 [FlyBase]
Description(s) found:
Found 16 descriptions.
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  • The gene shaven is referred to in FlyBase by the symbol Dmel\sv (CG11049, FBgn0005561). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 4:1109444..1133943. It has the cytological map location 102F8. It is reported to have molecular function</span>: RNA polymerase II transcription factor activity; transcription factor activity. There is experimental evidence that it is involved in the biological process</span>: dendrite morphogenesis; neuron development; muscle organ development. 52 alleles are reported. The phenotypes of these alleles are annotated with 20 unique terms, many of which group under: peripheral nervous system; external compound sense organ; nervous system; organ system; adult segment; compound cell cluster organ; rhabdomere; imaginal precursor; antennal segment; primary pigment cell; cell projection; unguis; adult mesothoracic segment. It has 8 annotated transcripts and 8 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 842 amino acids

    Gene Ontology:
    Cellular Component: nucleus [NAS]
    Biological Process: muscle organ development [IMP]
    neuron development [IMP]
    regulation of transcription [IEA][NAS]
    compound eye cone cell fate commitment [TAS]
    dendrite morphogenesis [IMP]
    Molecular Function: DNA binding [IEA]
    transcription factor activity [TAS]
    RNA polymerase II transcription factor activity [NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIMDIQTST HHIHGLGTHE LQHRILHPHI LHSTQEETLN TSTGQLEHDS QHLQQHHLTH  60
   61 HQQQDVSPTL HNLQNTRTGD SLSTTINTNQ NQHGHQHLSG SNMYTSSQME DKSKANKYDE 120
  121 YSSRTLSNIS DANTTPSANN FITQSQGIEW ITAMNDIQNG AEDSHSSQGS ISGDGHGGVN 180
  181 QLGGVFVNGR PLPDVVRQRI VELAHNGVRP CDISRQLRVS HGCVSKILSR YYETGSFKAG 240
  241 VIGGSKPKVA TPPVVDAIAN YKRENPTMFA WEIRDRLLAE AICSQDNVPS VSSINRIVRN 300
  301 KAAEKAKHVH HHQQHHVSQS LGGGHIATES VDSSTGTIGE PQPPTSNSSA NSVNTNVSAS 360
  361 ASVHASIPTS GTDSVQVSVG HINANSNETT HINSTAEQRT TGYSINGILG IQHGHHSHNN 420
  421 NNNSSVNNNN NTESSCKRKR IEAHDENHDT NIHSDNDDGK RQRMSTYSGD QLYTNIWSGK 480
  481 WCIKDDHKLL AELGNLTAST GNCPATYYEA SNGFSTTPIS GSGATASGND TSMLYDSITT 540
  541 ISQTQSSIYT PAIGPSIGSL TPLVPISMHE MKLSANSIQE QTVPPFYTAL AFDGNYTSMT 600
  601 SLENCSSLVG QEHIVMPESS DSNTLCPIST RIVPDITETN STRVKEPLTN SDGCSEDNNK 660
  661 EPEKSNSSQS SDHIASPHLH HIGEEQLRGN RRSNLNASTH PSSLIPLQPS GGSSLLNINP 720
  721 SENRSDVELN LSNNVGLYST PTVLPSFNHY SAGCSSVVPG SDYAYNPAYT QYGGAYGSYG 780
  781 YGTGSGLINS SYYYESGQTQ SPLTHDLRSP LVATRANSLA SAASPGSGSA CTKSESSDIF 840
  841 LA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..170] MSA 1.203969 View MSA. No confident structure predictions are available.
    2 View Details [171..307] PSI-BLAST 63.0 Pax-5
    3 View Details [308..512] FFAS03 2.21 No description for 2h8rA was found.
    4 View Details [513..725] MSA 5.293997 View MSA. No confident structure predictions are available.
    5 View Details [726..842] MSA 4.198976 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle