Description(s) found:
SHOW ONLY BEST
|
gi|85816106|ref|NP_724288.3| varicose, isoform B [Drosophila melanogaster]
[NCBI NR]
gi|84795336|gb|AAN11089.3| varicose, isoform B [Drosophila melanogaster]
[NCBI NR]
The gene varicose is referred to in FlyBase by the symbol Dmel\vari (CG9326, FBgn0250785). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2L:20788659..20797040. It has the cytological map location 39D3-40B1. Based on sequence similarity, it is predicted to have molecular function</span>: guanylate kinase activity. There is experimental evidence that it is involved in the biological process</span>: dorsal trunk growth, open tracheal system; regulation of tube size, open tracheal system; open tracheal system development; regulation of tube length, open tracheal system; septate junction assembly. 29 alleles are reported. The phenotypes of these alleles are annotated with 11 unique terms, many of which group under: organ system; embryonic/larval tracheal system; portion of tissue; tracheal system; trachea; embryonic dorsal trunk; larval dorsal trunk; wing hair; embryonic tracheal system; embryonic ganglionic branch; external compound sense organ; plasma membrane part. It has 3 annotated transcripts and 3 annotated polypeptides.
[FlyBase]
type=protein; loc=2L:complement(20789247..20789423,20789586..20789660,20789721..20790052,20790125..20790335,20790391..20790552,20790622..20790720,20791167..20791664,20792114..20792266,20796037..20796134,20796653..20796758); ID=FBpp0088886; name=vari-PB; p
[fly-100309-contam.fasta]
CG9326-PB, isoform B [Drosophila melanogaster]
[nr-271106-contam.fasta]
type=protein; loc=2L:complement(20789247..20789423,20789586..20789660,20789721..20790052,20790125..20790335,20790391..20790552,20790622..20790720,20791167..20791664,20792114..20792266,20796037..20796134,20796653..20796758); ID=FBpp0088886; name=vari-PB; parent=FBgn0250785,FBtr0089947; dbxref=FlyBase_Annotation_IDs:CG9326-PB,FlyBase:FBpp0088886,GB_protein:AAN11089.2,GB_protein:AAN11089.3,REFSEQ:NP_724288,GB_protein:AAN11089; MD5=7e0605a8c882da0527d23b4ac8b9bc23; length=636; release=r5.16; species=Dmel;
[fly-contam-His-TEV-Tub4complex.fasta]
type=protein; loc=2L:complement(20789247..20789423,20789586..20789660,20789721..20790052,20790125..20790335,20790391..20790552,20790622..20790720,20791167..20791664,20792114..20792266,20796037..20796134,20796653..20796758); ID=FBpp0088886; name=vari-PB; parent=FBgn0250785,FBtr0089947; dbxref=FlyBase_Annotation_IDs:CG9326-PB,FlyBase:FBpp0088886,GB_protein:AAN11089.2,GB_protein:AAN11089.3,REFSEQ:NP_724288,GB_protein:AAN11089; MD5=7e0605a8c882da0527d23b4ac8b9bc23; length=636; release=r5.21; species=Dmel;
[Other_drosophila_na_09-09-2009_reversed.fasta]
Varicose, isoform B OS=Drosophila melanogaster GN=vari PE=2 SV=2
[UniProt_drosophila_07-01-2011_reversed.fasta]
type=protein; loc=2L:complement(20789247..20789423,20789586..20789660,20789721..20790052,20790125..20790335,20790391..20790552,20790622..20790720,20791167..20791664,20792114..20792266,20796037..20796134,20796653..20796758); ID=FBpp0088886; name=vari-PB; parent=FBgn0250785,FBtr0089947; dbxref=FlyBase_Annotation_IDs:CG9326-PB,FlyBase:FBpp0088886,GB_protein:AAN11089.2,GB_protein:AAN11089.3,REFSEQ:NP_724288,GB_protein:AAN11089,FlyMine:FBpp0088886,modMine:FBpp0088886; MD5=7e0605a8c882da0527d23b4ac8b9bc23; length=636; release=r5.46; species=Dmel;
[fly-062812-sfps-sandra-contam.fasta]
FI17352p1 OS=Drosophila melanogaster GN=vari PE=2 SV=2
[UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
type=protein; loc=2L:complement(join(20796653..20796758,20796037..20796134,20792114..20792266,20791167..20791664,20790622..20790720,20790391..20790552,20790125..20790335,20789721..20790052,20789586..20789660,20789247..20789423)); ID=FBpp0088886; name=vari-PB; parent=FBgn0250785,FBtr0089947; dbxref=FlyBase_Annotation_IDs:CG9326-PB,FlyBase:FBpp0088886,GB_protein:AAN11089.2,GB_protein:AAN11089.3,REFSEQ:NP_724288,GB_protein:AAN11089,FlyMine:FBpp0088886,modMine:FBpp0088886; MD5=7e0605a8c882da0527d23b4ac8b9bc23; length=636; release=r6.02; species=Dmel;
[fly-2014-05-contam.fasta]
type=protein; loc=2L:complement(join(20796653..20796758,20796037..20796134,20792114..20792266,20791167..20791664,20790622..20790720,20790391..20790552,20790125..20790335,20789721..20790052,20789586..20789660,20789247..20789423)); ID=FBpp0088886; name=vari-PB; parent=FBgn0250785,FBtr0089947; dbxref=FlyBase_Annotation_IDs:CG9326-PB,FlyBase:FBpp0088886,GB_protein:AAN11089.2,GB_protein:AAN11089.3,REFSEQ:NP_724288,GB_protein:AAN11089,FlyMine:FBpp0088886,modMine:FBpp0088886; MD5=7e0605a8c882da0527d23b4ac8b9bc23; length=636; release=r6.07; species=Dmel;
[fly-08202015-contam.fasta]
FI17352p1 OS=Drosophila melanogaster GN=vari PE=1 SV=2
[DROME.fasta.20160308]
FBpp0088886 type=protein; loc=2L:complement(join(20796653..20796758,20796037..20796134,20792114..20792266,20791167..20791664,20790622..20790720,20790391..20790552,20790125..20790335,20789721..20790052,20789586..20789660,20789247..20789423)); ID=FBpp0088886; name=vari-PB; parent=FBgn0250785,FBtr0089947; dbxref=FlyBase_Annotation_IDs:CG9326-PB,FlyBase:FBpp0088886,GB_protein:AAN11089.2,GB_protein:AAN11089.3,REFSEQ:NP_724288,GB_protein:AAN11089,FlyMine:FBpp0088886,modMine:FBpp0088886; MD5=7e0605a8c882da0527d23b4ac8b9bc23; length=636; release=r6.09; species=Dmel;
[dmel-all-translation-r6.09.fasta]
[fly-122215-dmel-6-09-contam.fasta]
type=protein; loc=2L:complement(join(20796653..20796758,20796037..20796134,20792114..20792266,20791167..20791664,20790622..20790720,20790391..20790552,20790125..20790335,20789721..20790052,20789586..20789660,20789247..20789423)); ID=FBpp0088886; name=vari-PB; parent=FBgn0250785,FBtr0089947; dbxref=FlyBase_Annotation_IDs:CG9326-PB,FlyBase:FBpp0088886,GB_protein:AAN11089.2,GB_protein:AAN11089.3,REFSEQ:NP_724288,GB_protein:AAN11089,UniProt/TrEMBL:Q7KT16,FlyMine:FBpp0088886,modMine:FBpp0088886; MD5=7e0605a8c882da0527d23b4ac8b9bc23; length=636; release=r6.14; species=Dmel;
[fly-dmel-jan2017-sandracontam.fasta]
|