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Protein Overview: gi|51594557, gi|...

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..519] PSI-BLAST 110.0 Structure of the RecQ Catalytic Core
2 View Details [520..610] PSI-BLAST 26.0 E. coli RecQ HRDC domain

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • DNA helicase activity
  • 5.33108843895592 bayes_pls_golite062009
  • four-way junction helicase activity
  • 5.20361383647271 bayes_pls_golite062009
  • binding
  • 2.64537357529343 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 2.16381244011837 bayes_pls_golite062009
  • pyrophosphatase activity
  • 2.13284212711072 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
  • 2.11265775498161 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
  • 2.11046854230259 bayes_pls_golite062009
  • single-stranded DNA-dependent ATPase activity
  • 1.8195489846634 bayes_pls_golite062009
  • helicase activity
  • 1.70242731830224 bayes_pls_golite062009
  • single-stranded DNA-dependent ATP-dependent DNA helicase activity
  • 1.69315154404254 bayes_pls_golite062009
  • hydrolase activity
  • 1.66122526893602 bayes_pls_golite062009
  • ATPase activity
  • 1.53315090215319 bayes_pls_golite062009
  • RNA helicase activity
  • 1.42791449104435 bayes_pls_golite062009
  • nucleic acid binding
  • 1.41477043612798 bayes_pls_golite062009
  • RNA-dependent ATPase activity
  • 1.39335733374328 bayes_pls_golite062009
  • ATP-dependent RNA helicase activity
  • 1.36724390116598 bayes_pls_golite062009
  • microtubule motor activity
  • 1.30090199952739 bayes_pls_golite062009
  • structure-specific DNA binding
  • 1.2539059700735 bayes_pls_golite062009
  • DNA-dependent ATPase activity
  • 1.2155186842031 bayes_pls_golite062009
  • ATP-dependent helicase activity
  • 1.19311444180077 bayes_pls_golite062009
  • purine NTP-dependent helicase activity
  • 1.19311444180077 bayes_pls_golite062009
  • double-stranded DNA binding
  • 1.117585097627 bayes_pls_golite062009
  • DNA binding
  • 1.11699929651302 bayes_pls_golite062009
  • motor activity
  • 1.03253378953548 bayes_pls_golite062009
  • catalytic activity
  • 1.00104173493322 bayes_pls_golite062009
  • transcription regulator activity
  • 0.989226939888218 bayes_pls_golite062009
  • ATP-dependent DNA helicase activity
  • 0.5886142102548 bayes_pls_golite062009
  • single-stranded DNA binding
  • 0.568457189190858 bayes_pls_golite062009
  • 0.442119153778711 bayes_pls_golite062009
  • mismatched DNA binding
  • 0.31144582840038 bayes_pls_golite062009
  • exodeoxyribonuclease V activity
  • 0.185603938981231 bayes_pls_golite062009
  • protein binding
  • 0.170837278876362 bayes_pls_golite062009
  • nucleotide binding
  • 0.114848452385726 bayes_pls_golite062009
  • purine nucleotide binding
  • 0.10713474095071 bayes_pls_golite062009
  • purine ribonucleotide binding
  • 0.0916519414118148 bayes_pls_golite062009
  • ribonucleotide binding
  • 0.0915913646217636 bayes_pls_golite062009
  • transcription factor activity
  • 0.0434163635422169 bayes_pls_golite062009
  • RNA binding
  • 0.0261282189186349 bayes_pls_golite062009
    2 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle